RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 GUCA1AP43080 201 aaPredicted RBP3.19□□□□□ -1.9
LINC00397-202ENST00000606785 FOXA1P55317 472 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 TPPP2P59282 170 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 GABARAPL2P60520 117 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 MYL5Q02045 173 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 PMAIP1Q13794 54 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 ZNF695Q8IW36 515 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 LINC00337Q8N6G1 96 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 SLC25A29Q8N8R3 303 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 SLC25A46Q96AG3 418 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 VAMP8Q9BV40 100 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 SPANXDQ9BXN6 97 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 MRPL20Q9BYC9 149 aaKnown RBP3.19□□□□□ -1.9
LINC00397-202ENST00000606785 DPY30Q9C005 99 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 CHST6Q9GZX3 395 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 TMEM222Q9H0R3 208 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 IER3IP1Q9Y5U9 82 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 ATP7BP35670 1465 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 SAMD9Q5K651 1589 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 HECW2Q9P2P5 1572 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 DYSFO75923 2080 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 ATG2AQ2TAZ0 1938 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 AHDC1Q5TGY3 1603 aaPredicted RBP3.19□□□□□ -1.9
LINC00397-202ENST00000606785 ADGRB3O60242 1522 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 HMGXB3Q12766 1538 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 BLMP54132 1417 aaPredicted RBP3.19□□□□□ -1.9
LINC00397-202ENST00000606785 TRIP11Q15643 1979 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 CFAP43Q8NDM7 1665 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 PLXNC1O60486 1568 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 ATP10BO94823 1461 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 TRAV5A0A0B4J249 113 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 C7orf71A4D174 169 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 RBFOX3A6NFN3 312 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 FAM183AA6NL82 134 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 H3BQ15 152 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 HLA-DQB1P01920 261 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 MRPL3P09001 348 aaKnown RBP3.18□□□□□ -1.9
LINC00397-202ENST00000606785 SMIM10L2AP0DMW4 78 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 SMIM10L2BP0DMW5 78 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 LINC00694P0DN24 101 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 SNCAP37840 140 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 NUDT2P50583 147 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 AKR1C1Q04828 323 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 MEIG1Q5JSS6 88 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 HEPN1Q6WQI6 88 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 LRP11Q86VZ4 500 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 OR2M3Q8NG83 312 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 OR52R1Q8NGF1 315 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 TSLPQ969D9 159 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 ADAT3Q96EY9 351 aaPredicted RBP3.18□□□□□ -1.9
LINC00397-202ENST00000606785 THTPAQ9BU02 230 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 WDR61Q9GZS3 305 aaKnown RBP3.18□□□□□ -1.9
LINC00397-202ENST00000606785 OR51E2Q9H255 320 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 RPRMQ9NS64 109 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 RBM22Q9NW64 420 aaKnown RBP eCLIP3.18□□□□□ -1.9
LINC00397-202ENST00000606785 C21orf62Q9NYP8 219 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 UQCR10Q9UDW1 63 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 ABCC2Q92887 1545 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 DCCP43146 1447 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 CABIN1Q9Y6J0 2220 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 CUL7Q14999 1698 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 ITSN1Q15811 1721 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 ARAP2Q8WZ64 1704 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 C7orf66A4D0T2 115 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 BBIP1A8MTZ0 92 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 FNDC10F2Z333 226 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 K7EQS6 105 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 UPK2O00526 184 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 NPFFO15130 113 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BKO60814 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BJP06899 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 LINC00869P0C866 280 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 IGLC6P0CF74 106 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 CPMP14384 443 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BOP23527 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 NFYBP25208 207 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BBP33778 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 MARCKSL1P49006 195 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BDP58876 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BCP62807 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 PRDX4Q13162 271 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 IHHQ14623 411 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 MMDQ15546 238 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST2H2BEQ16778 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.17□□□□□ -1.9
LINC00397-202ENST00000606785 IBA57Q5T440 356 aaKnown RBP3.17□□□□□ -1.9
LINC00397-202ENST00000606785 XAF1Q6GPH4 301 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 UNQ5815/PRO19632Q6UWF5 114 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 SBSNQ6UWP8 590 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 KRTAP11-1Q8IUC1 163 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 TEX29Q8N6K0 151 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 OR8B12Q8NGG6 310 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 OR5AK2Q8NH90 309 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BHQ93079 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 PITX2Q99697 317 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BNQ99877 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BMQ99879 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 RNF5Q99942 180 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 RTBDNQ9BSG5 229 aaPredicted RBP3.17□□□□□ -1.9
LINC00397-202ENST00000606785 MRPL32Q9BYC8 188 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms