RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 GUCA1AP43080 201 aaPredicted RBP3.19□□□□□ -1.9
LINC00397-202ENST00000606785 FOXA1P55317 472 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 TPPP2P59282 170 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 GABARAPL2P60520 117 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 MYL5Q02045 173 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 PMAIP1Q13794 54 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 ZNF695Q8IW36 515 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 LINC00337Q8N6G1 96 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 SLC25A29Q8N8R3 303 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 SLC25A46Q96AG3 418 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 VAMP8Q9BV40 100 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 SPANXDQ9BXN6 97 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 MRPL20Q9BYC9 149 aaKnown RBP3.19□□□□□ -1.9
LINC00397-202ENST00000606785 DPY30Q9C005 99 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 CHST6Q9GZX3 395 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 TMEM222Q9H0R3 208 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 IER3IP1Q9Y5U9 82 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 ATP7BP35670 1465 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 SAMD9Q5K651 1589 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 HECW2Q9P2P5 1572 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 DYSFO75923 2080 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 ATG2AQ2TAZ0 1938 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 AHDC1Q5TGY3 1603 aaPredicted RBP3.19□□□□□ -1.9
LINC00397-202ENST00000606785 ADGRB3O60242 1522 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 HMGXB3Q12766 1538 aa3.19□□□□□ -1.9
LINC00397-202ENST00000606785 BLMP54132 1417 aaPredicted RBP3.19□□□□□ -1.9
LINC00397-202ENST00000606785 TRIP11Q15643 1979 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 CFAP43Q8NDM7 1665 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 PLXNC1O60486 1568 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 ATP10BO94823 1461 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 TRAV5A0A0B4J249 113 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 C7orf71A4D174 169 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 RBFOX3A6NFN3 312 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 FAM183AA6NL82 134 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 H3BQ15 152 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 HLA-DQB1P01920 261 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 MRPL3P09001 348 aaKnown RBP3.18□□□□□ -1.9
LINC00397-202ENST00000606785 SMIM10L2AP0DMW4 78 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 SMIM10L2BP0DMW5 78 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 LINC00694P0DN24 101 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 SNCAP37840 140 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 NUDT2P50583 147 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 AKR1C1Q04828 323 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 MEIG1Q5JSS6 88 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 HEPN1Q6WQI6 88 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 LRP11Q86VZ4 500 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 OR2M3Q8NG83 312 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 OR52R1Q8NGF1 315 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 TSLPQ969D9 159 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 ADAT3Q96EY9 351 aaPredicted RBP3.18□□□□□ -1.9
LINC00397-202ENST00000606785 THTPAQ9BU02 230 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 WDR61Q9GZS3 305 aaKnown RBP3.18□□□□□ -1.9
LINC00397-202ENST00000606785 OR51E2Q9H255 320 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 RPRMQ9NS64 109 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 RBM22Q9NW64 420 aaKnown RBP eCLIP3.18□□□□□ -1.9
LINC00397-202ENST00000606785 C21orf62Q9NYP8 219 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 UQCR10Q9UDW1 63 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 ABCC2Q92887 1545 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 DCCP43146 1447 aa3.18□□□□□ -1.9
LINC00397-202ENST00000606785 CABIN1Q9Y6J0 2220 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 CUL7Q14999 1698 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 ITSN1Q15811 1721 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 ARAP2Q8WZ64 1704 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 C7orf66A4D0T2 115 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 BBIP1A8MTZ0 92 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 FNDC10F2Z333 226 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 K7EQS6 105 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 UPK2O00526 184 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 NPFFO15130 113 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BKO60814 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BJP06899 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 LINC00869P0C866 280 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 IGLC6P0CF74 106 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 CPMP14384 443 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BOP23527 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 NFYBP25208 207 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BBP33778 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 MARCKSL1P49006 195 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BDP58876 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BCP62807 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 PRDX4Q13162 271 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 IHHQ14623 411 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 MMDQ15546 238 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST2H2BEQ16778 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.17□□□□□ -1.9
LINC00397-202ENST00000606785 IBA57Q5T440 356 aaKnown RBP3.17□□□□□ -1.9
LINC00397-202ENST00000606785 XAF1Q6GPH4 301 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 UNQ5815/PRO19632Q6UWF5 114 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 SBSNQ6UWP8 590 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 KRTAP11-1Q8IUC1 163 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 TEX29Q8N6K0 151 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 OR8B12Q8NGG6 310 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 OR5AK2Q8NH90 309 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BHQ93079 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 PITX2Q99697 317 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BNQ99877 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 HIST1H2BMQ99879 126 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 RNF5Q99942 180 aa3.17□□□□□ -1.9
LINC00397-202ENST00000606785 RTBDNQ9BSG5 229 aaPredicted RBP3.17□□□□□ -1.9
LINC00397-202ENST00000606785 MRPL32Q9BYC8 188 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms