RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 RNF2Q99496 336 aa13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 VAMP8Q9BV40 100 aa13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 CDC42EP3Q9UKI2 254 aa13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 PAM16Q9Y3D7 125 aa13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 APC2O95996 2303 aa13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 H0YJW9 148 aa13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 AMY1AP04745 511 aa13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 CHRNB4P30926 498 aa13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 UBE2L3P68036 154 aaKnown RBP13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 ABHD17AQ96GS6 310 aa13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 SERTAD4Q9NUC0 356 aa13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 FBXL7Q9UJT9 491 aa13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 DYSFO75923 2080 aa13.66□□□□□ -0.22
PRKCSH-205ENST00000587327 SMG1Q96Q15 3661 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 E7EUB6 86 aa13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 CCL8P80075 99 aa13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 RP1L1Q8IWN7 2480 aaPredicted RBP13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 FAM103A1Q9BTL3 118 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 ZNF586Q9NXT0 402 aa13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 CUL9Q8IWT3 2517 aa13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 SPTBN2O15020 2390 aa13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 HLA-DQA1P01909 254 aa13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 MEF2CQ06413 473 aaPredicted RBP13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 TMEM177Q53S58 311 aa13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 MRPL54Q6P161 138 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 FLYWCH2Q96CP2 140 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 LINC00479Q96M42 142 aa13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 TBL2Q9Y4P3 447 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 RNF114Q9Y508 228 aa13.65□□□□□ -0.22
PRKCSH-205ENST00000587327 A0A1W2PS18 150 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 NKX6-3A6NJ46 265 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 BMPR1BO00238 502 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 ZNF253O75346 499 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 USF1P22415 310 aaPredicted RBP13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 KCNS1Q96KK3 526 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 RCHY1Q96PM5 261 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 AMMECR1Q9Y4X0 333 aaPredicted RBP13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 IZUMO1RA6ND01 250 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 FOSL1P15407 271 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 SRIP30626 198 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 KRTDAPP60985 99 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 SSBP2P81877 361 aaPredicted RBP13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 Q8N976 141 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 Q8NA96 180 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 NHLRC2Q8NBF2 726 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 NUP37Q8NFH4 326 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 NRN1Q9NPD7 142 aa13.64□□□□□ -0.23
PRKCSH-205ENST00000587327 ACACAQ13085 2346 aa13.63□□□□□ -0.23
PRKCSH-205ENST00000587327 A0A1W2PN81 502 aa13.63□□□□□ -0.23
PRKCSH-205ENST00000587327 CA1P00915 261 aaPredicted RBP13.63□□□□□ -0.23
PRKCSH-205ENST00000587327 CCL3L1P16619 93 aa13.63□□□□□ -0.23
PRKCSH-205ENST00000587327 TNFRSF1AP19438 455 aa13.63□□□□□ -0.23
PRKCSH-205ENST00000587327 REG1BP48304 166 aa13.63□□□□□ -0.23
PRKCSH-205ENST00000587327 AMTP48728 403 aa13.63□□□□□ -0.23
PRKCSH-205ENST00000587327 WT1-ASQ06250 92 aa13.63□□□□□ -0.23
PRKCSH-205ENST00000587327 OR4C13Q8NGP0 309 aa13.63□□□□□ -0.23
PRKCSH-205ENST00000587327 TMEM167AQ8TBQ9 72 aa13.63□□□□□ -0.23
PRKCSH-205ENST00000587327 FAM168AQ92567 244 aa13.63□□□□□ -0.23
PRKCSH-205ENST00000587327 DIRC3C9JPN6 131 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 COX7A2P2O60397 106 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 APCSP02743 223 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 PYYP10082 97 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 C10orf113Q5VZT2 155 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 TMEM200BQ69YZ2 307 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 OR4A5Q8NH83 315 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 FNDC4Q9H6D8 234 aaPredicted RBP13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 ZNF355PQ9NSJ1 428 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 ATMQ13315 3056 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 A0A0G2JNJ9 132 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 CGB1A6NKQ9 187 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 FOXC1Q12948 553 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 PATE2Q6UY27 113 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 OR1L4Q8NGR5 311 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 VSTM2AQ8TAG5 236 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 NPIPB3Q92617 1050 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 PAXXQ9BUH6 204 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 Q9UFV3 132 aa13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 PTPRZ1P23471 2315 aaPredicted RBP13.62□□□□□ -0.23
PRKCSH-205ENST00000587327 ZNF324O75467 553 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 FCN3O75636 299 aa13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 G0S2P27469 103 aa13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 FAM231DQ6ZW35 169 aa13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 ZNF329Q86UD4 541 aa13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 SPACA3Q8IXA5 215 aa13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 OR4B1Q8NGF8 309 aa13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 ZNF430Q9H8G1 570 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 ZNF331Q9NQX6 463 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 MAP1BP46821 2468 aaKnown RBP13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 IGKV1D-37A0A075B6S9 117 aa13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 TCRBV4S1A1TA0A5B7 111 aa13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 PMCHP20382 165 aa13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 SUB1P53999 127 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 RASL11AQ6T310 242 aa13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 PDPNQ86YL7 162 aa13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 WIPF2Q8TF74 440 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 MBD6Q96DN6 1003 aa13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 SSBP3Q9BWW4 388 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-205ENST00000587327 DCHS1Q96JQ0 3298 aa13.6□□□□□ -0.23
PRKCSH-205ENST00000587327 C17orf100A8MU93 164 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms