RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 TUBGCP6Q96RT7 1819 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 TAL2Q16559 108 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 DPM3Q9P2X0 92 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 A0A096LPF7 62 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 LOC101059948A0A1B0GTJ6 334 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 A0A1W2PPI3 338 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 C9orf153Q5TBE3 101 aa13.38□□□□□ -0.27
CACNA1A-202ENST00000573710 KLK8O60259 260 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 TFF3Q07654 80 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 SRXN1Q9BYN0 137 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 ZNF98A6NK75 572 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 PCNX1Q96RV3 2341 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 SRSF1Q07955 248 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 HOGA1Q86XE5 327 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 TSC2P49815 1807 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 A6NNC1 897 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 OR5P3Q8WZ94 311 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 FOCADQ5VW36 1801 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 TRAV12-2A0A075B6T6 113 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 PFN2P35080 140 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 MED12LQ86YW9 2145 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 A0A1W2PQD3 144 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 FAM57AQ8TBR7 257 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 LINC00477Q96M19 166 aa13.37□□□□□ -0.27
CACNA1A-202ENST00000573710 PEBP1P30086 187 aaKnown RBP13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 CXCL10P02778 98 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 SSBP2P81877 361 aaPredicted RBP13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 TIMM17AQ99595 171 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 RGPD4Q7Z3J3 1758 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 F5H768 121 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 IGKCP01834 107 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 TMEM91Q6ZNR0 172 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 TJP1Q07157 1748 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 ANK1P16157 1881 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 PLXNB2O15031 1838 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 ORMDL2Q53FV1 153 aa13.36□□□□□ -0.27
CACNA1A-202ENST00000573710 PLXND1Q9Y4D7 1925 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 TIMM23BQ5SRD1 257 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 SMRP1Q8NCR6 262 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 KLHL30-AS1Q8NEE0 82 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 C5orf30Q96GV9 206 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 C14orf132Q9NPU4 83 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 NRXN3Q9Y4C0 1643 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 ITGBL1O95965 494 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 C9orf62Q8N4C0 152 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 ZIC1Q15915 447 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 ZIC4Q8N9L1 334 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 DKK4Q9UBT3 224 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 DMKNQ6E0U4 476 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 LINC00299Q6ZSB3 139 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 NEU4Q8WWR8 484 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 SPXQ9BT56 116 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 EGR2P11161 476 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 UCP3P55916 312 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 ZNF876PQ49A33 203 aa13.35□□□□□ -0.27
CACNA1A-202ENST00000573710 GAS1P54826 345 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 RND3P61587 244 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 NDPQ00604 133 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 J3QW42 95 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 MMP23AO75900 390 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 TMEM222Q9H0R3 208 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 PLAC1Q9HBJ0 212 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 DOCK1Q14185 1865 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 IGHV3-16A0A0C4DH30 117 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 OR10W1Q8NGF6 305 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 FAM216BQ8N7L0 139 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 FMC1Q96HJ9 113 aa13.34□□□□□ -0.27
CACNA1A-202ENST00000573710 CXCL2P19875 107 aa13.33□□□□□ -0.27
CACNA1A-202ENST00000573710 SPATA25Q9BR10 227 aa13.33□□□□□ -0.27
CACNA1A-202ENST00000573710 IGKV2-40A0A087WW87 121 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 LOC102723996A0A087X1L8 192 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 IGKV2D-40P01614 121 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 RHOGP84095 191 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 PPP1R32Q7Z5V6 425 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 TMEM52Q8NDY8 209 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 MRPL32Q9BYC8 188 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 LOC285556D6RIA3 1793 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 TIMM23O14925 209 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 MAPK1IP1LQ8NDC0 245 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 SCAND1P57086 179 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 C8orf82Q6P1X6 216 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 A0A1B0GW15 77 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 ZNF729A6NN14 1252 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 IGKV1D-16P01601 117 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 TFF1P04155 84 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 UMODP07911 640 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 UBE2BP63146 152 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 RBM3P98179 157 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 SS18Q15532 418 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 C8orf31Q8N9H6 132 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 TNRC6AQ8NDV7 1962 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 FCN3O75636 299 aa13.33□□□□□ -0.28
CACNA1A-202ENST00000573710 ZP1P60852 638 aa13.32□□□□□ -0.28
CACNA1A-202ENST00000573710 DNAJC30Q96LL9 226 aa13.32□□□□□ -0.28
CACNA1A-202ENST00000573710 ACACAQ13085 2346 aa13.32□□□□□ -0.28
CACNA1A-202ENST00000573710 FAM27BQ5VT28 67 aa13.32□□□□□ -0.28
CACNA1A-202ENST00000573710 CENPVL1A0A0U1RR11 272 aa13.32□□□□□ -0.28
CACNA1A-202ENST00000573710 ASCL2Q99929 193 aa13.32□□□□□ -0.28
CACNA1A-202ENST00000573710 TRPM7Q96QT4 1865 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms