RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 C9orf106Q8NAJ2 232 aa10.55□□□□□ -0.72
SYNM-203ENST00000560674 MBD3L1Q8WWY6 194 aa10.55□□□□□ -0.72
SYNM-203ENST00000560674 COQ2Q96H96 371 aa10.55□□□□□ -0.72
SYNM-203ENST00000560674 PARP14Q460N5 1801 aa10.55□□□□□ -0.72
SYNM-203ENST00000560674 FAM90A9PA6NNJ1 464 aa10.55□□□□□ -0.72
SYNM-203ENST00000560674 UMODP07911 640 aa10.55□□□□□ -0.72
SYNM-203ENST00000560674 DEPPQ9NTK1 212 aa10.55□□□□□ -0.72
SYNM-203ENST00000560674 SCN2AQ99250 2005 aa10.55□□□□□ -0.72
SYNM-203ENST00000560674 IGLV3-12A0A075B6K2 115 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 PRCDQ00LT1 54 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 SRSF1Q07955 248 aaKnown RBP eCLIP10.54□□□□□ -0.72
SYNM-203ENST00000560674 C1QL4Q86Z23 238 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 NEUROG3Q9Y4Z2 214 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 ZNF236Q9UL36 1845 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 TMEM95Q3KNT9 176 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 TEX38Q6PEX7 206 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 NXT2Q9NPJ8 142 aaKnown RBP10.54□□□□□ -0.72
SYNM-203ENST00000560674 PSG8Q9UQ74 426 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 IFI27P40305 119 aaPredicted RBP10.54□□□□□ -0.72
SYNM-203ENST00000560674 FBLN7Q53RD9 439 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 FNDC4Q9H6D8 234 aaPredicted RBP10.54□□□□□ -0.72
SYNM-203ENST00000560674 WDR83OSQ9Y284 106 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 TRAV8-2A0A0B4J237 113 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 OR9G9P0C7N8 305 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 CHCHD1Q96BP2 118 aaKnown RBP10.54□□□□□ -0.72
SYNM-203ENST00000560674 IGLV3-32A0A0A0MS00 114 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 PPBPP02775 128 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 LINC00469Q8N7U9 141 aa10.54□□□□□ -0.72
SYNM-203ENST00000560674 SCN8AQ9UQD0 1980 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 IGKV1D-8A0A087WSZ0 117 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 IGHV3-11P01762 117 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 NUDT10Q8NFP7 164 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 HIST1H2BLQ99880 126 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 VKORC1Q9BQB6 163 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 TMEM133Q9H2Q1 129 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 TMEM242Q9NWH2 141 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 ICE1Q9Y2F5 2266 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 CD5P06127 495 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 CD7P09564 240 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 ZNF585BQ52M93 769 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 CFAP161Q6P656 301 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 MEGF9Q9H1U4 602 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 VSIRQ9H7M9 311 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 ZNF319Q9P2F9 582 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 DUTP33316 252 aaKnown RBP10.53□□□□□ -0.72
SYNM-203ENST00000560674 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 TSKUQ8WUA8 353 aa10.53□□□□□ -0.72
SYNM-203ENST00000560674 FAM168AQ92567 244 aa10.52□□□□□ -0.72
SYNM-203ENST00000560674 TDGF1P13385 188 aa10.52□□□□□ -0.72
SYNM-203ENST00000560674 ORAOV1Q8WV07 137 aa10.52□□□□□ -0.72
SYNM-203ENST00000560674 VWCEQ96DN2 955 aa10.52□□□□□ -0.72
SYNM-203ENST00000560674 LOC102723996A0A087X1L8 192 aa10.52□□□□□ -0.73
SYNM-203ENST00000560674 CYSLTR1Q9Y271 337 aa10.52□□□□□ -0.73
SYNM-203ENST00000560674 MTCL1Q9Y4B5 1905 aaKnown RBP10.52□□□□□ -0.73
SYNM-203ENST00000560674 TRGV2A0A075B6R0 118 aa10.52□□□□□ -0.73
SYNM-203ENST00000560674 TRAV21A0A0B4J279 112 aa10.52□□□□□ -0.73
SYNM-203ENST00000560674 ORMDL2Q53FV1 153 aa10.52□□□□□ -0.73
SYNM-203ENST00000560674 ATP5L2Q7Z4Y8 100 aa10.52□□□□□ -0.73
SYNM-203ENST00000560674 PEMTQ9UBM1 199 aa10.52□□□□□ -0.73
SYNM-203ENST00000560674 TRBV24-1A0A075B6N3 115 aa10.52□□□□□ -0.73
SYNM-203ENST00000560674 HIST3H2BBQ8N257 126 aa10.52□□□□□ -0.73
SYNM-203ENST00000560674 C7orf69Q9H7B7 122 aa10.52□□□□□ -0.73
SYNM-203ENST00000560674 SIP14410 1827 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 MYOD1P15172 320 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 IGHV4-39P01824 125 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 TFF1P04155 84 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 CSRP2Q16527 193 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 GFI1BQ5VTD9 330 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 FLVCR1-AS1Q8TAF5 88 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 GLMPQ8WWB7 406 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 HOXA3O43365 443 aaPredicted RBP10.51□□□□□ -0.73
SYNM-203ENST00000560674 IGKCP01834 107 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 PAX2Q02962 417 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 SRSF7Q16629 238 aaKnown RBP eCLIP10.51□□□□□ -0.73
SYNM-203ENST00000560674 SFTA2Q6UW10 78 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 JMJD8Q96S16 334 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 CHTOPQ9Y3Y2 248 aaKnown RBP10.51□□□□□ -0.73
SYNM-203ENST00000560674 SMAD7O15105 426 aaKnown RBP10.51□□□□□ -0.73
SYNM-203ENST00000560674 GAS1P54826 345 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 TNS1Q9HBL0 1735 aaKnown RBP10.51□□□□□ -0.73
SYNM-203ENST00000560674 COLCA2A8K830 154 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 RNF182Q8N6D2 247 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 YAE1D1Q9NRH1 226 aa10.51□□□□□ -0.73
SYNM-203ENST00000560674 SVILO95425 2214 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 CXCL1P09341 107 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 TMEM167AQ8TBQ9 72 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 SLC25A2Q9BXI2 301 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 IGKV3D-20A0A0C4DH25 116 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 GFRA3O60609 400 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 ABHD17AQ96GS6 310 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 TIMP3P35625 211 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 RALGAPA2Q2PPJ7 1873 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 TMEM42Q69YG0 159 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 C8orf46Q8TAG6 207 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 CRYGSP22914 178 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 PRB3Q04118 309 aaPredicted RBP10.5□□□□□ -0.73
SYNM-203ENST00000560674 TREML4Q6UXN2 200 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 COLCA1Q6ZS62 124 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 IFI27L1Q96BM0 104 aa10.5□□□□□ -0.73
SYNM-203ENST00000560674 CYTL1Q9NRR1 136 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms