RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 ZNF436Q9C0F3 470 aaPredicted RBP11.91□□□□□ -0.5
CHMP1A-206ENST00000549139 HIPK2Q9H2X6 1198 aa11.91□□□□□ -0.5
CHMP1A-206ENST00000549139 HEYLQ9NQ87 328 aaPredicted RBP11.91□□□□□ -0.5
CHMP1A-206ENST00000549139 SPNP16150 400 aa11.9□□□□□ -0.5
CHMP1A-206ENST00000549139 ANXA7P20073 488 aaKnown RBP11.9□□□□□ -0.5
CHMP1A-206ENST00000549139 DHRS2Q13268 280 aa11.9□□□□□ -0.5
CHMP1A-206ENST00000549139 C2orf83Q53S99 150 aa11.9□□□□□ -0.5
CHMP1A-206ENST00000549139 Q56UQ5 140 aa11.9□□□□□ -0.5
CHMP1A-206ENST00000549139 OR1S1Q8NH92 325 aa11.9□□□□□ -0.5
CHMP1A-206ENST00000549139 COQ8AQ8NI60 647 aa11.9□□□□□ -0.5
CHMP1A-206ENST00000549139 C20orf85Q9H1P6 137 aa11.9□□□□□ -0.5
CHMP1A-206ENST00000549139 ZC4H2Q9NQZ6 224 aa11.9□□□□□ -0.5
CHMP1A-206ENST00000549139 ALMS1Q8TCU4 4167 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 ZNF320A2RRD8 509 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 C2orf70A6NJV1 201 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 A8MWP6 167 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 UPK1BO75841 260 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 NXPH3O95157 252 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 CTSGP08311 255 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 HOXB5P09067 269 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 ADMP35318 185 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 ELLP55199 621 aaPredicted RBP11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 ASAH1Q13510 395 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 C4orf46Q504U0 113 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 MZT2BQ6NZ67 158 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 NOXA1Q86UR1 476 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 UBAC2Q8NBM4 344 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 DUSP18Q8NEJ0 188 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 CHRDL1Q9BU40 450 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 RBKSQ9H477 322 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 TBC1D24Q9ULP9 559 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 U3KQ87 197 aa11.89□□□□□ -0.51
CHMP1A-206ENST00000549139 FAM240BA0A1B0GVZ2 78 aa11.88□□□□□ -0.51
CHMP1A-206ENST00000549139 FAM90A26D6RGX4 464 aa11.88□□□□□ -0.51
CHMP1A-206ENST00000549139 NDUFA4O00483 81 aa11.88□□□□□ -0.51
CHMP1A-206ENST00000549139 NUPL2O15504 423 aaKnown RBP11.88□□□□□ -0.51
CHMP1A-206ENST00000549139 FOLR2P14207 255 aa11.88□□□□□ -0.51
CHMP1A-206ENST00000549139 GP9P14770 177 aa11.88□□□□□ -0.51
CHMP1A-206ENST00000549139 CBLN1P23435 193 aa11.88□□□□□ -0.51
CHMP1A-206ENST00000549139 NPBWR1P48145 328 aa11.88□□□□□ -0.51
CHMP1A-206ENST00000549139 GGNBP1Q5YKI7 109 aa11.88□□□□□ -0.51
CHMP1A-206ENST00000549139 SLC24A4Q8NFF2 622 aa11.88□□□□□ -0.51
CHMP1A-206ENST00000549139 OR2K2Q8NGT1 345 aa11.88□□□□□ -0.51
CHMP1A-206ENST00000549139 DTD1Q8TEA8 209 aa11.88□□□□□ -0.51
CHMP1A-206ENST00000549139 IGHV3-35A0A0C4DH35 117 aa11.87□□□□□ -0.51
CHMP1A-206ENST00000549139 GNG7O60262 68 aa11.87□□□□□ -0.51
CHMP1A-206ENST00000549139 IGHV3-48P01763 117 aa11.87□□□□□ -0.51
CHMP1A-206ENST00000549139 ATP5IP56385 69 aaPredicted RBP11.87□□□□□ -0.51
CHMP1A-206ENST00000549139 RELQ04864 619 aaPredicted RBP11.87□□□□□ -0.51
CHMP1A-206ENST00000549139 UNQ9165/PRO28630Q6UXU0 137 aa11.87□□□□□ -0.51
CHMP1A-206ENST00000549139 HAPLN4Q86UW8 402 aa11.87□□□□□ -0.51
CHMP1A-206ENST00000549139 RNASEH2CQ8TDP1 164 aaKnown RBP11.87□□□□□ -0.51
CHMP1A-206ENST00000549139 FNDC4Q9H6D8 234 aaPredicted RBP11.87□□□□□ -0.51
CHMP1A-206ENST00000549139 TECRQ9NZ01 308 aaKnown RBP11.87□□□□□ -0.51
CHMP1A-206ENST00000549139 UFC1Q9Y3C8 167 aa11.87□□□□□ -0.51
CHMP1A-206ENST00000549139 TRAV6A0A075B6T7 132 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 RPS10-NUDT3A0A1W2PQS6 291 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 TMEM213A2RRL7 107 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 MED6O75586 246 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 ADAP1O75689 374 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 TMEM50AO95807 157 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 IFNA21P01568 189 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 H2AFB2P0C5Z0 115 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 C8orf88P0DMB2 117 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 NPY1RP25929 384 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 OPRK1P41145 380 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 IFITM3Q01628 133 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 MLANAQ16655 118 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 DEFB114Q30KQ6 69 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 TM4SF20Q53R12 229 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 LCN12Q6JVE5 192 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 OR4X1Q8NH49 305 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 MITD1Q8WV92 249 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 TMEM170AQ8WVE7 144 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 TMEM190Q8WZ59 177 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 MARC2Q969Z3 335 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 NUDT15Q9NV35 164 aa11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 MRPL27Q9P0M9 148 aaKnown RBP11.86□□□□□ -0.51
CHMP1A-206ENST00000549139 K7EMT4 169 aa11.85□□□□□ -0.51
CHMP1A-206ENST00000549139 IFNA10P01566 189 aa11.85□□□□□ -0.51
CHMP1A-206ENST00000549139 EDN2P20800 178 aa11.85□□□□□ -0.51
CHMP1A-206ENST00000549139 ETFRF1Q6IPR1 90 aa11.85□□□□□ -0.51
CHMP1A-206ENST00000549139 UXS1Q8NBZ7 420 aa11.85□□□□□ -0.51
CHMP1A-206ENST00000549139 OR52B4Q8NGK2 314 aa11.85□□□□□ -0.51
CHMP1A-206ENST00000549139 DYNLRB2Q8TF09 96 aa11.85□□□□□ -0.51
CHMP1A-206ENST00000549139 ZNF414Q96IQ9 312 aa11.85□□□□□ -0.51
CHMP1A-206ENST00000549139 SYNGR2O43760 224 aa11.84□□□□□ -0.51
CHMP1A-206ENST00000549139 CLN5O75503 358 aa11.84□□□□□ -0.51
CHMP1A-206ENST00000549139 SLC25A4P12235 298 aa11.84□□□□□ -0.51
CHMP1A-206ENST00000549139 ID3Q02535 119 aa11.84□□□□□ -0.51
CHMP1A-206ENST00000549139 CD300EQ496F6 205 aaPredicted RBP11.84□□□□□ -0.51
CHMP1A-206ENST00000549139 Q8N1Y9 231 aa11.84□□□□□ -0.51
CHMP1A-206ENST00000549139 CIB3Q96Q77 187 aaPredicted RBP11.84□□□□□ -0.51
CHMP1A-206ENST00000549139 DAZ1Q9NQZ3 744 aaKnown RBP11.84□□□□□ -0.51
CHMP1A-206ENST00000549139 C19orf73Q9NVV2 129 aa11.84□□□□□ -0.51
CHMP1A-206ENST00000549139 TRAV30A0A087WSZ9 112 aa11.83□□□□□ -0.52
CHMP1A-206ENST00000549139 IZUMO1RA6ND01 250 aa11.83□□□□□ -0.52
CHMP1A-206ENST00000549139 C15orf62A8K5M9 175 aa11.83□□□□□ -0.52
CHMP1A-206ENST00000549139 MPTX1A8MV57 137 aa11.83□□□□□ -0.52
CHMP1A-206ENST00000549139 A8MZ25 164 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms