RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 OR10X1Q8NGY0 326 aa18.85■□□□□ 0.61
FOXA1-202ENST00000545425 CMTM2Q8TAZ6 248 aa18.85■□□□□ 0.61
FOXA1-202ENST00000545425 TMEM190Q8WZ59 177 aa18.85■□□□□ 0.61
FOXA1-202ENST00000545425 ZNF430Q9H8G1 570 aaPredicted RBP18.85■□□□□ 0.61
FOXA1-202ENST00000545425 SPENQ96T58 3664 aaKnown RBP18.85■□□□□ 0.61
FOXA1-202ENST00000545425 A0A0G2JNJ9 132 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 LGALS7P47929 136 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 UQCRFS1P47985 274 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 RAB4BP61018 213 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 CCL8P80075 99 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 DOLPP1Q86YN1 238 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 ZNF664Q8N3J9 261 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 ZNF503Q96F45 646 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 MRPL18Q9H0U6 180 aaKnown RBP18.84■□□□□ 0.61
FOXA1-202ENST00000545425 Q9UFV3 132 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 PSMB11A5LHX3 300 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 MYOD1P15172 320 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 TDGF1P3P51864 188 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 CX3CL1P78423 397 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 WFDC8Q8IUA0 241 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 STXBP6Q8NFX7 210 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 OR1L6Q8NGR2 347 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 OR9G1Q8NH87 305 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 TMEM106BQ9NUM4 274 aa18.84■□□□□ 0.61
FOXA1-202ENST00000545425 ZNF705GA8MUZ8 300 aaPredicted RBP18.83■□□□□ 0.6
FOXA1-202ENST00000545425 CRISP2P16562 243 aa18.83■□□□□ 0.6
FOXA1-202ENST00000545425 CRYBB3P26998 211 aa18.83■□□□□ 0.6
FOXA1-202ENST00000545425 SSTP61278 116 aa18.83■□□□□ 0.6
FOXA1-202ENST00000545425 ST6GALNAC6Q969X2 333 aa18.83■□□□□ 0.6
FOXA1-202ENST00000545425 CHRDL1Q9BU40 450 aa18.83■□□□□ 0.6
FOXA1-202ENST00000545425 PRO1933Q9H354 126 aa18.83■□□□□ 0.6
FOXA1-202ENST00000545425 CDC42EP3Q9UKI2 254 aa18.83■□□□□ 0.6
FOXA1-202ENST00000545425 RASL11AQ6T310 242 aa18.82■□□□□ 0.6
FOXA1-202ENST00000545425 C22orf34Q6ZV56 151 aa18.82■□□□□ 0.6
FOXA1-202ENST00000545425 MS4A10Q96PG2 267 aa18.82■□□□□ 0.6
FOXA1-202ENST00000545425 C2orf88Q9BSF0 95 aa18.82■□□□□ 0.6
FOXA1-202ENST00000545425 PAX2Q02962 417 aa18.81■□□□□ 0.6
FOXA1-202ENST00000545425 PVRIGQ6DKI7 326 aa18.81■□□□□ 0.6
FOXA1-202ENST00000545425 ST6GALNAC3Q8NDV1 305 aa18.81■□□□□ 0.6
FOXA1-202ENST00000545425 RND1Q92730 232 aa18.81■□□□□ 0.6
FOXA1-202ENST00000545425 RELNP78509 3460 aa18.81■□□□□ 0.6
FOXA1-202ENST00000545425 TCRBV4S1A1TA0A5B7 111 aa18.81■□□□□ 0.6
FOXA1-202ENST00000545425 BSPH1Q075Z2 132 aa18.81■□□□□ 0.6
FOXA1-202ENST00000545425 SMIM12Q96EX1 92 aa18.81■□□□□ 0.6
FOXA1-202ENST00000545425 ZNF835Q9Y2P0 537 aa18.81■□□□□ 0.6
FOXA1-202ENST00000545425 ASH1LQ9NR48 2969 aaKnown RBP18.81■□□□□ 0.6
FOXA1-202ENST00000545425 LRRK2Q5S007 2527 aa18.8■□□□□ 0.6
FOXA1-202ENST00000545425 GGTLC3B5MD39 225 aa18.8■□□□□ 0.6
FOXA1-202ENST00000545425 COX7A2P2O60397 106 aa18.8■□□□□ 0.6
FOXA1-202ENST00000545425 FSTL3O95633 263 aa18.8■□□□□ 0.6
FOXA1-202ENST00000545425 CHRNB4P30926 498 aa18.8■□□□□ 0.6
FOXA1-202ENST00000545425 FAM231DQ6ZW35 169 aa18.8■□□□□ 0.6
FOXA1-202ENST00000545425 MRPL52Q86TS9 123 aaKnown RBP18.8■□□□□ 0.6
FOXA1-202ENST00000545425 TEX45Q8NA69 505 aa18.8■□□□□ 0.6
FOXA1-202ENST00000545425 FAM167A-AS1Q96KT0 104 aa18.8■□□□□ 0.6
FOXA1-202ENST00000545425 IGF2BP2-AS1Q96M15 143 aa18.8■□□□□ 0.6
FOXA1-202ENST00000545425 NAGKQ9UJ70 344 aa18.8■□□□□ 0.6
FOXA1-202ENST00000545425 FCN1O00602 326 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 TMEM155Q4W5P6 130 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 OR10J3Q5JRS4 329 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 C1orf194Q5T5A4 169 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 TGIF2LXQ8IUE1 241 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 DCAF16Q9NXF7 216 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 SLC17A3O00476 420 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 HLA-DQA1P01909 254 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 THBDP07204 575 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 CCL3L1P16619 93 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 HNF1AP20823 631 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 DLX6P56179 175 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 UBE2L3P68036 154 aaKnown RBP18.79■□□□□ 0.6
FOXA1-202ENST00000545425 SRSF1Q07955 248 aaKnown RBP eCLIP18.79■□□□□ 0.6
FOXA1-202ENST00000545425 C10orf113Q5VZT2 155 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 SLC25A2Q9BXI2 301 aa18.79■□□□□ 0.6
FOXA1-202ENST00000545425 SMIM27A0A1W2PRY6 76 aa18.78■□□□□ 0.6
FOXA1-202ENST00000545425 CORTO00230 105 aa18.78■□□□□ 0.6
FOXA1-202ENST00000545425 IGLV2-23P01705 113 aa18.78■□□□□ 0.6
FOXA1-202ENST00000545425 CBLN1P23435 193 aa18.78■□□□□ 0.6
FOXA1-202ENST00000545425 COMPP49747 757 aaPredicted RBP18.78■□□□□ 0.6
FOXA1-202ENST00000545425 SUMO1P63165 101 aaKnown RBP18.78■□□□□ 0.6
FOXA1-202ENST00000545425 OR10W1Q8NGF6 305 aa18.78■□□□□ 0.6
FOXA1-202ENST00000545425 C22orf15Q8WYQ4 148 aa18.78■□□□□ 0.6
FOXA1-202ENST00000545425 RNASE6Q93091 150 aaKnown RBP18.78■□□□□ 0.6
FOXA1-202ENST00000545425 SNURFLB1AK76 121 aa18.77■□□□□ 0.6
FOXA1-202ENST00000545425 SCGB1D1O95968 90 aa18.77■□□□□ 0.6
FOXA1-202ENST00000545425 MOB3BQ86TA1 216 aa18.77■□□□□ 0.6
FOXA1-202ENST00000545425 TMEM256Q8N2U0 113 aa18.77■□□□□ 0.6
FOXA1-202ENST00000545425 H1FXQ92522 213 aaKnown RBP18.77■□□□□ 0.6
FOXA1-202ENST00000545425 KIR2DL5BA0A0G2JN68 375 aa18.77■□□□□ 0.59
FOXA1-202ENST00000545425 KIR2DL5BA0A0G2JPC4 375 aa18.77■□□□□ 0.59
FOXA1-202ENST00000545425 IBA57Q5T440 356 aaKnown RBP18.77■□□□□ 0.59
FOXA1-202ENST00000545425 KIR2DL5AQ8N109 375 aa18.77■□□□□ 0.59
FOXA1-202ENST00000545425 PAXXQ9BUH6 204 aa18.77■□□□□ 0.59
FOXA1-202ENST00000545425 AMY1AP04745 511 aa18.76■□□□□ 0.59
FOXA1-202ENST00000545425 LOXP28300 417 aaPredicted RBP18.76■□□□□ 0.59
FOXA1-202ENST00000545425 IER3P46695 156 aa18.76■□□□□ 0.59
FOXA1-202ENST00000545425 PRSS8Q16651 343 aa18.76■□□□□ 0.59
FOXA1-202ENST00000545425 OR8I2Q8N0Y5 310 aa18.76■□□□□ 0.59
FOXA1-202ENST00000545425 OR5AU1Q8NGC0 362 aa18.76■□□□□ 0.59
FOXA1-202ENST00000545425 WIPF2Q8TF74 440 aaPredicted RBP18.76■□□□□ 0.59
FOXA1-202ENST00000545425 IGLV2-8P01709 118 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms