RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 hCG_1818297A0A087WSY0 165 aa2.07□□□□□ -2.08
LEMD3-206ENST00000545026 TMEM212A6NML5 194 aa2.07□□□□□ -2.08
LEMD3-206ENST00000545026 A8MT66 165 aa2.07□□□□□ -2.08
LEMD3-206ENST00000545026 SERPINE1P05121 402 aa2.07□□□□□ -2.08
LEMD3-206ENST00000545026 SPA17Q15506 151 aa2.07□□□□□ -2.08
LEMD3-206ENST00000545026 AKIRIN2Q53H80 203 aa2.07□□□□□ -2.08
LEMD3-206ENST00000545026 RPS19BP1Q86WX3 136 aaKnown RBP2.07□□□□□ -2.08
LEMD3-206ENST00000545026 HIST3H2BBQ8N257 126 aa2.07□□□□□ -2.08
LEMD3-206ENST00000545026 SIGLECL1Q8N7X8 197 aa2.07□□□□□ -2.08
LEMD3-206ENST00000545026 OR5A1Q8NGJ0 315 aa2.07□□□□□ -2.08
LEMD3-206ENST00000545026 SIGMAR1Q99720 223 aa2.07□□□□□ -2.08
LEMD3-206ENST00000545026 ADAT1Q9BUB4 502 aaKnown RBP2.07□□□□□ -2.08
LEMD3-206ENST00000545026 A0A0D9SG52 128 aa2.06□□□□□ -2.08
LEMD3-206ENST00000545026 MRPS14O60783 128 aaKnown RBP2.06□□□□□ -2.08
LEMD3-206ENST00000545026 FKBP2P26885 142 aaKnown RBP2.06□□□□□ -2.08
LEMD3-206ENST00000545026 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
LEMD3-206ENST00000545026 Q8N2B8 174 aa2.06□□□□□ -2.08
LEMD3-206ENST00000545026 MED13Q9UHV7 2174 aa2.05□□□□□ -2.08
LEMD3-206ENST00000545026 RP1L1Q8IWN7 2480 aaPredicted RBP2.05□□□□□ -2.08
LEMD3-206ENST00000545026 COX6A1P12074 109 aa2.05□□□□□ -2.08
LEMD3-206ENST00000545026 SPI1P17947 270 aa2.05□□□□□ -2.08
LEMD3-206ENST00000545026 MRPS15P82914 257 aaKnown RBP2.05□□□□□ -2.08
LEMD3-206ENST00000545026 KHDC3LQ587J8 217 aa2.05□□□□□ -2.08
LEMD3-206ENST00000545026 UNQ6190/PRO20217Q6UXQ8 127 aa2.05□□□□□ -2.08
LEMD3-206ENST00000545026 DPPA3Q6W0C5 159 aa2.05□□□□□ -2.08
LEMD3-206ENST00000545026 C15orf53Q8NAA6 179 aa2.05□□□□□ -2.08
LEMD3-206ENST00000545026 CHMP6Q96FZ7 201 aa2.05□□□□□ -2.08
LEMD3-206ENST00000545026 RIC1Q4ADV7 1423 aa2.05□□□□□ -2.08
LEMD3-206ENST00000545026 CCDC88AQ3V6T2 1871 aa2.05□□□□□ -2.08
LEMD3-206ENST00000545026 OR7C1O76099 320 aaPredicted RBP2.04□□□□□ -2.08
LEMD3-206ENST00000545026 OR5F1O95221 314 aa2.04□□□□□ -2.08
LEMD3-206ENST00000545026 C8GP07360 202 aa2.04□□□□□ -2.08
LEMD3-206ENST00000545026 PPIBP23284 216 aaKnown RBP2.04□□□□□ -2.08
LEMD3-206ENST00000545026 HOXA6P31267 233 aa2.04□□□□□ -2.08
LEMD3-206ENST00000545026 CDK5R1Q15078 307 aa2.04□□□□□ -2.08
LEMD3-206ENST00000545026 LINC01554Q52M75 96 aa2.04□□□□□ -2.08
LEMD3-206ENST00000545026 OR4D11Q8NGI4 311 aa2.04□□□□□ -2.08
LEMD3-206ENST00000545026 DGCR14Q96DF8 476 aaKnown RBP2.04□□□□□ -2.08
LEMD3-206ENST00000545026 RTL1A6NKG5 1358 aa2.03□□□□□ -2.08
LEMD3-206ENST00000545026 SMIM17P0DL12 118 aa2.03□□□□□ -2.08
LEMD3-206ENST00000545026 HSD11B1P28845 292 aa2.03□□□□□ -2.08
LEMD3-206ENST00000545026 OR4E2Q8NGC2 313 aa2.03□□□□□ -2.08
LEMD3-206ENST00000545026 C2orf50Q96LR7 162 aa2.03□□□□□ -2.08
LEMD3-206ENST00000545026 NMNAT1Q9HAN9 279 aaPredicted RBP2.03□□□□□ -2.08
LEMD3-206ENST00000545026 OSTCQ9NRP0 149 aa2.03□□□□□ -2.08
LEMD3-206ENST00000545026 PCF11O94913 1555 aaKnown RBP2.02□□□□□ -2.09
LEMD3-206ENST00000545026 FUOMA2VDF0 154 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 C19orf84I3L1E1 186 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 TCL1BO95988 128 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 S100A4P26447 101 aaKnown RBP2.02□□□□□ -2.09
LEMD3-206ENST00000545026 CASP1P29466 404 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 RHEBQ15382 184 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 LIN52Q52LA3 116 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 C10orf55Q5SWW7 151 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 TEX36Q5VZQ5 186 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 TRAPPC6BQ86SZ2 158 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 SLC25A40Q8TBP6 338 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 BTF3L4Q96K17 158 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 KIFC1Q9BW19 673 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 MIXL1Q9H2W2 232 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 MED9Q9NWA0 146 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 ARL2BPQ9Y2Y0 163 aa2.02□□□□□ -2.09
LEMD3-206ENST00000545026 ADGRL3Q9HAR2 1447 aa2.01□□□□□ -2.09
LEMD3-206ENST00000545026 IGKV3D-7A0A0C4DH55 119 aa2.01□□□□□ -2.09
LEMD3-206ENST00000545026 IGKV3OR2-268A0A0C4DH90 116 aa2.01□□□□□ -2.09
LEMD3-206ENST00000545026 FAM159BA6NKW6 160 aa2.01□□□□□ -2.09
LEMD3-206ENST00000545026 ATP5HO75947 161 aa2.01□□□□□ -2.09
LEMD3-206ENST00000545026 CST2P09228 141 aa2.01□□□□□ -2.09
LEMD3-206ENST00000545026 RNASE3P12724 160 aaKnown RBP2.01□□□□□ -2.09
LEMD3-206ENST00000545026 CYBAP13498 195 aa2.01□□□□□ -2.09
LEMD3-206ENST00000545026 DEFA3P59666 94 aa2.01□□□□□ -2.09
LEMD3-206ENST00000545026 YPEL3P61236 119 aaPredicted RBP2.01□□□□□ -2.09
LEMD3-206ENST00000545026 Q6Q795 121 aa2.01□□□□□ -2.09
LEMD3-206ENST00000545026 SLC50A1Q9BRV3 221 aa2.01□□□□□ -2.09
LEMD3-206ENST00000545026 LYNX1P0DP58 116 aa2□□□□□ -2.09
LEMD3-206ENST00000545026 CAPZBP47756 277 aa2□□□□□ -2.09
LEMD3-206ENST00000545026 LCA10Q71F78 164 aa2□□□□□ -2.09
LEMD3-206ENST00000545026 LINC00471Q8N535 108 aa2□□□□□ -2.09
LEMD3-206ENST00000545026 SERPINI1Q99574 410 aa2□□□□□ -2.09
LEMD3-206ENST00000545026 RNF122Q9H9V4 155 aa2□□□□□ -2.09
LEMD3-206ENST00000545026 TVP23BQ9NYZ1 205 aa2□□□□□ -2.09
LEMD3-206ENST00000545026 SPANXN5Q5MJ07 72 aa1.99□□□□□ -2.09
LEMD3-206ENST00000545026 WFDC5Q8TCV5 224 aa1.99□□□□□ -2.09
LEMD3-206ENST00000545026 ADAT3Q96EY9 351 aaPredicted RBP1.99□□□□□ -2.09
LEMD3-206ENST00000545026 RETNLBQ9BQ08 111 aa1.99□□□□□ -2.09
LEMD3-206ENST00000545026 REG4Q9BYZ8 158 aa1.99□□□□□ -2.09
LEMD3-206ENST00000545026 PCDH15Q96QU1 1955 aa1.99□□□□□ -2.09
LEMD3-206ENST00000545026 RP1P56715 2156 aa1.99□□□□□ -2.09
LEMD3-206ENST00000545026 TRAV14DV4A0A0A6YYC5 116 aa1.98□□□□□ -2.09
LEMD3-206ENST00000545026 OR2T1O43869 369 aa1.98□□□□□ -2.09
LEMD3-206ENST00000545026 SERPINA1P01009 418 aa1.98□□□□□ -2.09
LEMD3-206ENST00000545026 ANGP03950 147 aaKnown RBP1.98□□□□□ -2.09
LEMD3-206ENST00000545026 ASAH2BP0C7U1 165 aa1.98□□□□□ -2.09
LEMD3-206ENST00000545026 MRPS25P82663 173 aaKnown RBP1.98□□□□□ -2.09
LEMD3-206ENST00000545026 SURF2Q15527 256 aaPredicted RBP1.98□□□□□ -2.09
LEMD3-206ENST00000545026 S100A7AQ86SG5 101 aa1.98□□□□□ -2.09
LEMD3-206ENST00000545026 C10orf105Q8TEF2 133 aa1.98□□□□□ -2.09
LEMD3-206ENST00000545026 AQP3Q92482 292 aa1.98□□□□□ -2.09
LEMD3-206ENST00000545026 PARVBQ9HBI1 364 aa1.98□□□□□ -2.09
LEMD3-206ENST00000545026 OR5AC2Q9NZP5 309 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms