RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SRXN1Q9BYN0 137 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 GP6Q9HCN6 339 aa4.36□□□□□ -1.71
PROM1-220ENST00000540805 BAHCC1Q9P281 2608 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 TRAV9-1A0A075B6T8 112 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 IGHV3OR16-12A0A075B7B8 117 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 IGHV2-70DA0A0C4DH43 119 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 DIRC3C9JPN6 131 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 J3QT63 122 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 RBFOX2O43251 390 aaKnown RBP eCLIP4.35□□□□□ -1.71
PROM1-220ENST00000540805 PMCHP20382 165 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 FCER1GP30273 86 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 PRDX2P32119 198 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 PLA2G2CQ5R387 149 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 OR4A47Q6IF82 309 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 FGFBP3Q8TAT2 258 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 SSMEM1Q8WWF3 244 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 IMMP1LQ96LU5 166 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 NDFIP1Q9BT67 221 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 C1QTNF5Q9BXJ0 243 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 THYN1Q9P016 225 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 UQCR10Q9UDW1 63 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 ZZEF1O43149 2961 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 HSBP1L1C9JCN9 74 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 LYNX1G3V0Z9 82 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 NDUFS8O00217 210 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 SNAI2O43623 268 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 PPBPP02775 128 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 CELA3BP08861 270 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 LYNX1P0DP58 116 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 CD59P13987 128 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 ACP1P24666 158 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 Q0VFX4 171 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 RIPPLY2Q5TAB7 128 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 ZNF841Q6ZN19 808 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 FGFRL1Q8N441 504 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 PRDM14Q9GZV8 571 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.35□□□□□ -1.71
PROM1-220ENST00000540805 C1RLQ9NZP8 487 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 HSPB7Q9UBY9 170 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 SLC45A2Q9UMX9 530 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 NPIPB11E5RHQ5 1161 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 FCN1O00602 326 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 SYNGR1O43759 233 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 IGLC2P0DOY2 106 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 IGLC3P0DOY3 106 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 GATA2P23769 480 aaPredicted RBP4.35□□□□□ -1.71
PROM1-220ENST00000540805 TAS2R45P59539 299 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 CEACAM21Q3KPI0 293 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 HCP5Q6MZN7 132 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 C1orf174Q8IYL3 243 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 ZNF738Q8NE65 137 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 OR1N2Q8NGR9 330 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 ORAOV1Q8WV07 137 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 STARD4Q96DR4 205 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 TAAR6Q96RI8 345 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 FGF23Q9GZV9 251 aaPredicted RBP4.35□□□□□ -1.71
PROM1-220ENST00000540805 DLL3Q9NYJ7 618 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 IL36BQ9NZH7 164 aa4.35□□□□□ -1.71
PROM1-220ENST00000540805 USP24Q9UPU5 2620 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 SLC17A3O00476 420 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 IGLV2-14P01704 120 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 TIMP3P35625 211 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 Q0VG73 95 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 MPV17L2Q567V2 206 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 MOB1BQ7L9L4 216 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 ASCL5Q7RTU5 278 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 DYNLRB2Q8TF09 96 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 DUX5Q96PT3 197 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 TXNDC17Q9BRA2 123 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 NACAE9PAV3 2078 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 TRAV24A0A0B4J272 114 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 PMS2P5A8MQ11 134 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 SNURFLB1AK76 121 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.34□□□□□ -1.71
PROM1-220ENST00000540805 DNPH1O43598 174 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 MMP23AO75900 390 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 ZNRF1Q8ND25 227 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 OR5A2Q8NGI9 324 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 OR1L1Q8NH94 360 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 FLYWCH2Q96CP2 140 aaKnown RBP4.34□□□□□ -1.71
PROM1-220ENST00000540805 ZNF331Q9NQX6 463 aaPredicted RBP4.34□□□□□ -1.71
PROM1-220ENST00000540805 CRIM1Q9NZV1 1036 aa4.34□□□□□ -1.71
PROM1-220ENST00000540805 A0A1W2PN81 502 aa4.34□□□□□ -1.72
PROM1-220ENST00000540805 CTRLP40313 264 aa4.34□□□□□ -1.72
PROM1-220ENST00000540805 IER3P46695 156 aa4.34□□□□□ -1.72
PROM1-220ENST00000540805 AMTP48728 403 aa4.34□□□□□ -1.72
PROM1-220ENST00000540805 RPEL1Q2QD12 228 aa4.34□□□□□ -1.72
PROM1-220ENST00000540805 HLA-DRB5Q30154 266 aa4.34□□□□□ -1.72
PROM1-220ENST00000540805 DRAM1Q8N682 238 aa4.34□□□□□ -1.72
PROM1-220ENST00000540805 OR1B1Q8NGR6 318 aa4.34□□□□□ -1.72
PROM1-220ENST00000540805 KLF14Q8TD94 323 aaPredicted RBP4.34□□□□□ -1.72
PROM1-220ENST00000540805 QTRT1Q9BXR0 403 aaKnown RBP4.34□□□□□ -1.72
PROM1-220ENST00000540805 TBL2Q9Y4P3 447 aaKnown RBP4.34□□□□□ -1.72
PROM1-220ENST00000540805 IGHV3OR16-8A0A075B7F1 116 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 IGKV3D-15A0A087WSY6 115 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 IGHV3-49A0A0A0MS15 119 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 TRBV9A0A0B4J1U6 114 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 TRAV8-6A0A0B4J262 113 aa4.33□□□□□ -1.72
PROM1-220ENST00000540805 SCO2A0A1W2PP80 73 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms