RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 GOLGA8KD6RF30 607 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 M0R378 163 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 IGKV1-5P01602 117 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 APOEP02649 317 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 MYL12AP19105 171 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 DEFB113Q30KQ7 82 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 LINC00575Q6W349 94 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 GRINAQ7Z429 371 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 HIST3H2BBQ8N257 126 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 SIGLECL1Q8N7X8 197 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 OR13C4Q8NGS5 318 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 OR10J5Q8NHC4 309 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 TERB2Q8NHR7 220 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 KLK6Q92876 244 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 GPR146Q96CH1 333 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 PRRT1Q99946 306 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 C6orf62Q9GZU0 229 aaPredicted RBP-0.12□□□□□ -2.43
ATM-217ENST00000531957 DCSTAMPQ9H295 470 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 PLEKHJ1Q9NW61 149 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 HS3ST2Q9Y278 367 aa-0.12□□□□□ -2.43
ATM-217ENST00000531957 TOPBP1Q92547 1522 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 CASP8AP2Q9UKL3 1982 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 TLCD2A6NGC4 264 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 IQCF5A8MTL0 148 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 UBE2G2P60604 165 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 KRTAP26-1Q6PEX3 210 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 SPINK6Q6UWN8 80 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 PLEKHG7Q6ZR37 379 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 PLPP5Q8NEB5 264 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 PIGXQ8TBF5 258 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 NHP2Q9NX24 153 aaKnown RBP-0.13□□□□□ -2.43
ATM-217ENST00000531957 EPDR1Q9UM22 224 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 ERGIC3Q9Y282 383 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 RAD50Q92878 1312 aa-0.13□□□□□ -2.43
ATM-217ENST00000531957 KIF13BQ9NQT8 1826 aa-0.14□□□□□ -2.43
ATM-217ENST00000531957 LINC00854A0A1B0GVQ3 168 aa-0.14□□□□□ -2.43
ATM-217ENST00000531957 TRBV6-4A0A1B0GX49 114 aa-0.14□□□□□ -2.43
ATM-217ENST00000531957 CALUO43852 315 aaPredicted RBP-0.14□□□□□ -2.43
ATM-217ENST00000531957 RPS12P25398 132 aaKnown RBP-0.14□□□□□ -2.43
ATM-217ENST00000531957 NAA20P61599 178 aa-0.14□□□□□ -2.43
ATM-217ENST00000531957 LPCAT3Q6P1A2 487 aa-0.14□□□□□ -2.43
ATM-217ENST00000531957 LRRC25Q8N386 305 aaPredicted RBP-0.14□□□□□ -2.43
ATM-217ENST00000531957 OR51D1Q8NGF3 324 aa-0.14□□□□□ -2.43
ATM-217ENST00000531957 TEX47Q8TBZ9 253 aa-0.14□□□□□ -2.43
ATM-217ENST00000531957 TSPAN32Q96QS1 320 aa-0.14□□□□□ -2.43
ATM-217ENST00000531957 FGFR1OP2Q9NVK5 253 aa-0.14□□□□□ -2.43
ATM-217ENST00000531957 TP73-AS1Q9UF72 201 aa-0.14□□□□□ -2.43
ATM-217ENST00000531957 CCL16O15467 120 aa-0.15□□□□□ -2.43
ATM-217ENST00000531957 IFNA10P01566 189 aa-0.15□□□□□ -2.43
ATM-217ENST00000531957 MLLT11Q13015 90 aaPredicted RBP-0.15□□□□□ -2.43
ATM-217ENST00000531957 LRRN1Q6UXK5 716 aa-0.15□□□□□ -2.43
ATM-217ENST00000531957 LINC00301Q8NCQ3 95 aa-0.15□□□□□ -2.43
ATM-217ENST00000531957 OR13D1Q8NGV5 346 aa-0.15□□□□□ -2.43
ATM-217ENST00000531957 UPF3BQ9BZI7 483 aaKnown RBP-0.15□□□□□ -2.43
ATM-217ENST00000531957 OR51V1Q9H2C8 321 aa-0.15□□□□□ -2.43
ATM-217ENST00000531957 OSTCQ9NRP0 149 aa-0.15□□□□□ -2.43
ATM-217ENST00000531957 C14orf105Q9NVL8 296 aa-0.15□□□□□ -2.43
ATM-217ENST00000531957 FBXL12Q9NXK8 326 aa-0.15□□□□□ -2.43
ATM-217ENST00000531957 TNFSF18Q9UNG2 199 aa-0.15□□□□□ -2.43
ATM-217ENST00000531957 ABCC11Q96J66 1382 aa-0.16□□□□□ -2.43
ATM-217ENST00000531957 PIK3R4Q99570 1358 aa-0.16□□□□□ -2.43
ATM-217ENST00000531957 TRAV9-1A0A075B6T8 112 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 CXCR6O00574 342 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 S100A4P26447 101 aaKnown RBP-0.16□□□□□ -2.44
ATM-217ENST00000531957 PSMB6P28072 239 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 HOXA6P31267 233 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 SKP1P63208 163 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 PMAIP1Q13794 54 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 C6orf52Q5T4I8 152 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 HIST2H3PS2Q5TEC6 136 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 Q6ZS92 163 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 TRAPPC6BQ86SZ2 158 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 H1FXQ92522 213 aaKnown RBP-0.16□□□□□ -2.44
ATM-217ENST00000531957 C11orf68Q9H3H3 251 aaKnown RBP-0.16□□□□□ -2.44
ATM-217ENST00000531957 XPNPEP1Q9NQW7 623 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 CMTM6Q9NX76 183 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 V9GYY5 206 aaPredicted RBP-0.16□□□□□ -2.44
ATM-217ENST00000531957 EVC2Q86UK5 1308 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 MYO3BQ8WXR4 1341 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 CITO14578 2027 aa-0.16□□□□□ -2.44
ATM-217ENST00000531957 MACF1Q9UPN3 7388 aaKnown RBP-0.17□□□□□ -2.44
ATM-217ENST00000531957 NSD1Q96L73 2696 aaPredicted RBP-0.17□□□□□ -2.44
ATM-217ENST00000531957 IGHV1-58A0A0C4DH39 117 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 DPRXA6NFQ7 191 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 M0QZ92 97 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 C8orf88P0DMB2 117 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 ZNF137PP52743 207 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 BRMS1LQ5PSV4 323 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 OGFRL1Q5TC84 451 aaPredicted RBP-0.17□□□□□ -2.44
ATM-217ENST00000531957 ST6GALNAC3Q8NDV1 305 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 RAB8BQ92930 207 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 TOMM6Q96B49 74 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 NABP2Q9BQ15 211 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 OR51I1Q9H343 314 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 PRTFDC1Q9NRG1 225 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 MED29Q9NX70 200 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 TAS2R7Q9NYW3 318 aa-0.17□□□□□ -2.44
ATM-217ENST00000531957 LSM5Q9Y4Y9 91 aaKnown RBP-0.17□□□□□ -2.44
ATM-217ENST00000531957 ZFYVE26Q68DK2 2539 aa-0.18□□□□□ -2.44
ATM-217ENST00000531957 IGLV3-32A0A0A0MS00 114 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms