RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 AP2S1P53680 142 aaPredicted RBP0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 CDC42P60953 191 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 PSME3P61289 254 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 LPCAT4Q643R3 524 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 SPATA8Q6RVD6 105 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 OOSP2Q86WS3 158 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 BPIFA4PQ86YQ2 179 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 CLVS1Q8IUQ0 354 aaPredicted RBP0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 HIST3H2BBQ8N257 126 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 SIGLECL1Q8N7X8 197 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 C3orf56Q8N813 242 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 OR13D1Q8NGV5 346 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 C4orf3Q8WVX3 66 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 ITFG2Q969R8 447 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 IMP4Q96G21 291 aaKnown RBP0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 PPP1R2P1Q96PQ5 205 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 ULBP3Q9BZM4 244 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 C11orf68Q9H3H3 251 aaKnown RBP0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 RNF122Q9H9V4 155 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 PRTFDC1Q9NRG1 225 aa0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 NHP2Q9NX24 153 aaKnown RBP0.08□□□□□ -2.4
RNU2-56P-201ENST00000516826 MTUS2Q5JR59 1369 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 WRNQ14191 1432 aaPredicted RBP eCLIP0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 TRAV1-1A0A0B4J248 108 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 ZNF736B4DX44 427 aaPredicted RBP0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 CETN3O15182 167 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 TTRP02766 147 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 CASQ1P31415 396 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 RPL5P46777 297 aaKnown RBP0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 RPS20P60866 119 aaKnown RBP0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 MPV17LQ2QL34 196 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 LINC01554Q52M75 96 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 KHDC3LQ587J8 217 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 HIST2H3PS2Q5TEC6 136 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 LPCAT3Q6P1A2 487 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 OR52R1Q8NGF1 315 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 SMR3AQ99954 134 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 COMMD5Q9GZQ3 224 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 DRC3Q9H069 523 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 RASL12Q9NYN1 266 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 NKIRAS1Q9NYS0 192 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 EPDR1Q9UM22 224 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 ERGIC3Q9Y282 383 aa0.07□□□□□ -2.4
RNU2-56P-201ENST00000516826 TRAV9-1A0A075B6T8 112 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 TGIF2-C20orf24A0A0A6YYL0 155 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 TRAV26-2A0A0B4J265 109 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 PQLC2LA1A4F0 135 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 OR4C46A6NHA9 309 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 PSMD12O00232 456 aaPredicted RBP0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 CCL25O15444 150 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 CHP2O43745 196 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 IFNA5P01569 189 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 CALB1P05937 261 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 TPM3P06753 285 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 SERPINA6P08185 405 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 KRTAP2-3P0C7H8 128 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 CD79AP11912 226 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 ZNF25P17030 456 aaPredicted RBP0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 SULT1A1P50225 295 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 EFNA4P52798 201 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 NKX2-5P52952 324 aaPredicted RBP0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 SPCS3P61009 180 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 IMPG1Q17R60 797 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 IAH1Q2TAA2 248 aaPredicted RBP0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 DEFB113Q30KQ7 82 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 RNASE10Q5GAN6 216 aaKnown RBP0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 CDKL4Q5MAI5 379 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 LCA10Q71F78 164 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 OR51D1Q8NGF3 324 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 GINS4Q9BRT9 223 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 TMEM147Q9BVK8 224 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 KRTAP2-4Q9BYR9 128 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 KRTAP2-1Q9BYU5 128 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 SLC39A9Q9NUM3 307 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 VPS29Q9UBQ0 182 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 CHCHD2Q9Y6H1 151 aaPredicted RBP0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 MEGF8Q7Z7M0 2845 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 ROBO3Q96MS0 1386 aa0.06□□□□□ -2.4
RNU2-56P-201ENST00000516826 ANAPC1Q9H1A4 1944 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 SNAPC4Q5SXM2 1469 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 FAT4Q6V0I7 4981 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 C7orf71A4D174 169 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 CCL16O15467 120 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 SULT1B1O43704 296 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 PROSCO94903 275 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 IFNA16P05015 189 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 OR4E1P0C645 316 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 MGST1P10620 155 aaKnown RBP0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 TPM4P67936 248 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 PSG9Q00887 426 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 CCDC122Q5T0U0 273 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 ANKRD29Q8N6D5 301 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 OR8D4Q8NGM9 314 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 PATE1Q8WXA2 126 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 BORCS5Q969J3 196 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 ADAT3Q96EY9 351 aaPredicted RBP0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 C2orf50Q96LR7 162 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 PRRT1Q99946 306 aa0.05□□□□□ -2.4
RNU2-56P-201ENST00000516826 MRPS26Q9BYN8 205 aaKnown RBP0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms