RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 GINS3Q9BRX5 216 aa8.04□□□□□ -1.12
RNF4-212ENST00000509258 INS-IGF2F8WCM5 200 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 SCGB2A1O75556 95 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 YIF1AO95070 293 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 TMEM50AO95807 157 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 ERHP84090 104 aaKnown RBP8.03□□□□□ -1.12
RNF4-212ENST00000509258 TRIM16LQ309B1 348 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 BSXQ3C1V8 233 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 SELENOHQ8IZQ5 122 aaKnown RBP8.03□□□□□ -1.12
RNF4-212ENST00000509258 GBGT1Q8N5D6 347 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 GATAD1Q8WUU5 269 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 GPR146Q96CH1 333 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 SOSTQ9BQB4 213 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 SLIRPQ9GZT3 109 aaKnown RBP8.03□□□□□ -1.12
RNF4-212ENST00000509258 MFFQ9GZY8 342 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 TMEM222Q9H0R3 208 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 COPZ2Q9P299 210 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 GPR132Q9UNW8 380 aa8.03□□□□□ -1.12
RNF4-212ENST00000509258 MPTX1A8MV57 137 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 H3BMQ9 156 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 GNG7O60262 68 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 NXPH3O95157 252 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 CDS2O95674 445 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 IFNA17P01571 189 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 AARDQ4LEZ3 155 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 SLC35G3Q8N808 338 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 OR51S1Q8NGJ8 323 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 ZFAND1Q8TCF1 268 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 DIRAS2Q96HU8 199 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 CSTL1Q9H114 145 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 TMEM231Q9H6L2 316 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 VSIRQ9H7M9 311 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 NAA60Q9H7X0 242 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 MAP6D1Q9H9H5 199 aa8.02□□□□□ -1.13
RNF4-212ENST00000509258 CCDC59Q9P031 241 aaKnown RBP8.02□□□□□ -1.13
RNF4-212ENST00000509258 PUS1Q9Y606 427 aaKnown RBP eCLIP8.02□□□□□ -1.13
RNF4-212ENST00000509258 TRAV14DV4A0A0A6YYC5 116 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 TEX13DA0A0J9YY54 714 aaPredicted RBP8.01□□□□□ -1.13
RNF4-212ENST00000509258 ANKRD20A5PA0PJZ0 165 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 CRYM-AS1A6NIL9 109 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 CTDSPLO15194 276 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 ATG12O94817 140 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 IGKV1-17P01599 117 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 IFNA4P05014 189 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 NPBWR1P48145 328 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 HOXA1P49639 335 aaPredicted RBP8.01□□□□□ -1.13
RNF4-212ENST00000509258 SSBP1Q04837 148 aaKnown RBP8.01□□□□□ -1.13
RNF4-212ENST00000509258 IL18Q14116 193 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 TIGITQ495A1 244 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 TCF24Q7RTU0 167 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 CCDC71LQ8N9Z2 235 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 RAB2BQ8WUD1 216 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 PDCD10Q9BUL8 212 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 CACNG5Q9UF02 275 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 VPS13DQ5THJ4 4388 aa8.01□□□□□ -1.13
RNF4-212ENST00000509258 CORTO00230 105 aa8□□□□□ -1.13
RNF4-212ENST00000509258 GSTZ1O43708 216 aaPredicted RBP8□□□□□ -1.13
RNF4-212ENST00000509258 DFFBO76075 338 aa8□□□□□ -1.13
RNF4-212ENST00000509258 AKAIN1P0CW23 69 aa8□□□□□ -1.13
RNF4-212ENST00000509258 TNFSF8P32971 234 aa8□□□□□ -1.13
RNF4-212ENST00000509258 TMBIM6P55061 237 aa8□□□□□ -1.13
RNF4-212ENST00000509258 SUPT4H1P63272 117 aaKnown RBP8□□□□□ -1.13
RNF4-212ENST00000509258 TMEM187Q14656 261 aa8□□□□□ -1.13
RNF4-212ENST00000509258 TMEM268Q5VZI3 342 aa8□□□□□ -1.13
RNF4-212ENST00000509258 CENPSQ8N2Z9 138 aa8□□□□□ -1.13
RNF4-212ENST00000509258 RPP25LQ8N5L8 163 aaKnown RBP8□□□□□ -1.13
RNF4-212ENST00000509258 DUSP18Q8NEJ0 188 aa8□□□□□ -1.13
RNF4-212ENST00000509258 PHLDA1Q8WV24 401 aaPredicted RBP8□□□□□ -1.13
RNF4-212ENST00000509258 RARRES2Q99969 163 aa8□□□□□ -1.13
RNF4-212ENST00000509258 DNAH6Q9C0G6 4158 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 A0A1W2PS18 150 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 DISC1C4P0D8 188 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 DNASE2O00115 360 aaPredicted RBP7.99□□□□□ -1.13
RNF4-212ENST00000509258 CLN5O75503 358 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 SNCAP37840 140 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 OPRK1P41145 380 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 SUB1P53999 127 aaKnown RBP eCLIP7.99□□□□□ -1.13
RNF4-212ENST00000509258 TCTAP57738 103 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 MRPS10P82664 201 aaKnown RBP7.99□□□□□ -1.13
RNF4-212ENST00000509258 RBMS2Q15434 407 aaKnown RBP7.99□□□□□ -1.13
RNF4-212ENST00000509258 LEMD1Q68G75 181 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 LGALS9CQ6DKI2 356 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 ZNF600Q6ZNG1 722 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 RNASE11Q8TAA1 199 aaKnown RBP7.99□□□□□ -1.13
RNF4-212ENST00000509258 C15orf40Q8WUR7 153 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 RBPMSQ93062 196 aaKnown RBP7.99□□□□□ -1.13
RNF4-212ENST00000509258 TRIM63Q969Q1 353 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 RRNAD1Q96FB5 475 aaKnown RBP7.99□□□□□ -1.13
RNF4-212ENST00000509258 NARS2Q96I59 477 aaKnown RBP7.99□□□□□ -1.13
RNF4-212ENST00000509258 MS4A6AQ9H2W1 248 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 C14orf166Q9Y224 244 aaKnown RBP7.99□□□□□ -1.13
RNF4-212ENST00000509258 TMEM56-RWDD3S4R434 201 aa7.99□□□□□ -1.13
RNF4-212ENST00000509258 TRAV2A0A0B4J234 112 aa7.98□□□□□ -1.13
RNF4-212ENST00000509258 DEDDO75618 318 aa7.98□□□□□ -1.13
RNF4-212ENST00000509258 GIG44P09565 113 aaPredicted RBP7.98□□□□□ -1.13
RNF4-212ENST00000509258 IGLC1P0CG04 106 aa7.98□□□□□ -1.13
RNF4-212ENST00000509258 RPL5P46777 297 aaKnown RBP7.98□□□□□ -1.13
RNF4-212ENST00000509258 SPCS3P61009 180 aa7.98□□□□□ -1.13
RNF4-212ENST00000509258 RPL11P62913 178 aaKnown RBP7.98□□□□□ -1.13
RNF4-212ENST00000509258 KLF9Q13886 244 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms