RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 NDUFA4O00483 81 aa11.44□□□□□ -0.58
RNF4-210ENST00000508235 CSN3P07498 182 aa11.44□□□□□ -0.58
RNF4-210ENST00000508235 NKX2-1P43699 371 aaPredicted RBP11.44□□□□□ -0.58
RNF4-210ENST00000508235 RAB11AP62491 216 aa11.44□□□□□ -0.58
RNF4-210ENST00000508235 ID3Q02535 119 aa11.44□□□□□ -0.58
RNF4-210ENST00000508235 IAH1Q2TAA2 248 aaPredicted RBP11.44□□□□□ -0.58
RNF4-210ENST00000508235 UXS1Q8NBZ7 420 aa11.44□□□□□ -0.58
RNF4-210ENST00000508235 OR4D5Q8NGN0 318 aa11.44□□□□□ -0.58
RNF4-210ENST00000508235 MARVELD1Q9BSK0 173 aa11.44□□□□□ -0.58
RNF4-210ENST00000508235 UFC1Q9Y3C8 167 aa11.44□□□□□ -0.58
RNF4-210ENST00000508235 TRAV30A0A087WSZ9 112 aa11.43□□□□□ -0.58
RNF4-210ENST00000508235 MPTX1A8MV57 137 aa11.43□□□□□ -0.58
RNF4-210ENST00000508235 SNRPGP15A8MWD9 76 aa11.43□□□□□ -0.58
RNF4-210ENST00000508235 IFNA4P05014 189 aa11.43□□□□□ -0.58
RNF4-210ENST00000508235 CTSGP08311 255 aa11.43□□□□□ -0.58
RNF4-210ENST00000508235 ELLP55199 621 aaPredicted RBP11.43□□□□□ -0.58
RNF4-210ENST00000508235 KRTAP10-11P60412 298 aa11.43□□□□□ -0.58
RNF4-210ENST00000508235 IL34Q6ZMJ4 242 aa11.43□□□□□ -0.58
RNF4-210ENST00000508235 OR4X1Q8NH49 305 aa11.43□□□□□ -0.58
RNF4-210ENST00000508235 MARC2Q969Z3 335 aa11.43□□□□□ -0.58
RNF4-210ENST00000508235 AURKAIP1Q9NWT8 199 aaPredicted RBP11.43□□□□□ -0.58
RNF4-210ENST00000508235 C5orf51A6NDU8 294 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 C2orf70A6NJV1 201 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 CLN5O75503 358 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 IGLV1-51P01701 117 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 IGHV3-48P01763 117 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 IAPPP10997 89 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 ADMP35318 185 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 ZBTB8BQ8NAP8 495 aaPredicted RBP11.42□□□□□ -0.58
RNF4-210ENST00000508235 OR2K2Q8NGT1 345 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 DYNLRB2Q8TF09 96 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 OR10C1Q96KK4 312 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 CHRDL1Q9BU40 450 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 MAGT1Q9H0U3 335 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 FNDC4Q9H6D8 234 aaPredicted RBP11.42□□□□□ -0.58
RNF4-210ENST00000508235 TECRQ9NZ01 308 aaKnown RBP11.42□□□□□ -0.58
RNF4-210ENST00000508235 GSKIPQ9P0R6 139 aa11.42□□□□□ -0.58
RNF4-210ENST00000508235 ZNF256Q9Y2P7 627 aaPredicted RBP11.42□□□□□ -0.58
RNF4-210ENST00000508235 IGHV3-35A0A0C4DH35 117 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 FAM25EA8MYX2 175 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 TMEM50AO95807 157 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 SCGB1D2O95969 90 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 PTTG1O95997 202 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 FOLR2P14207 255 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 CBLN1P23435 193 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 LCN12Q6JVE5 192 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 GSG1LQ6UXU4 331 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 TMEM116Q8NCL8 245 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 TMEM170AQ8WVE7 144 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 TMEM190Q8WZ59 177 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 C2orf50Q96LR7 162 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 RAB40CQ96S21 281 aa11.41□□□□□ -0.58
RNF4-210ENST00000508235 DAZ1Q9NQZ3 744 aaKnown RBP11.41□□□□□ -0.58
RNF4-210ENST00000508235 MRPL27Q9P0M9 148 aaKnown RBP11.41□□□□□ -0.58
RNF4-210ENST00000508235 NBEAL1Q6ZS30 2694 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 C15orf62A8K5M9 175 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 K7EMT4 169 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 PRB2P02812 416 aaPredicted RBP11.4□□□□□ -0.58
RNF4-210ENST00000508235 GPX4P36969 197 aaPredicted RBP11.4□□□□□ -0.58
RNF4-210ENST00000508235 POLR2GP62487 172 aaKnown RBP eCLIP11.4□□□□□ -0.58
RNF4-210ENST00000508235 CD69Q07108 199 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 MLANAQ16655 118 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 SPANXN5Q5MJ07 72 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 C11orf87Q6NUJ2 197 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 PRSS54Q6PEW0 395 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 UNQ9165/PRO28630Q6UXU0 137 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 ZNF600Q6ZNG1 722 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 SLC16A13Q7RTY0 426 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 CACNG8Q8WXS5 425 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 C20orf24Q9BUV8 137 aa11.4□□□□□ -0.58
RNF4-210ENST00000508235 PAIP2BQ9ULR5 123 aaKnown RBP11.4□□□□□ -0.58
RNF4-210ENST00000508235 STRAPQ9Y3F4 350 aaKnown RBP11.4□□□□□ -0.58
RNF4-210ENST00000508235 TMEM213A2RRL7 107 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 CCSO14618 274 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 SSSCA1O60232 199 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 YIF1AO95070 293 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 SPNP16150 400 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 RND2P52198 227 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 TAS2R30P59541 319 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 OR1S2Q8NGQ3 325 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 MRAPQ8TCY5 172 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 SLC35E1Q96K37 410 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 SMIM8Q96KF7 97 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 GINS3Q9BRX5 216 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 PSENENQ9NZ42 101 aa11.39□□□□□ -0.59
RNF4-210ENST00000508235 C8orf88P0DMB2 117 aa11.38□□□□□ -0.59
RNF4-210ENST00000508235 GP9P14770 177 aa11.38□□□□□ -0.59
RNF4-210ENST00000508235 BMI1P35226 326 aa11.38□□□□□ -0.59
RNF4-210ENST00000508235 TM4SF20Q53R12 229 aa11.38□□□□□ -0.59
RNF4-210ENST00000508235 MRPL36Q9P0J6 103 aaKnown RBP11.38□□□□□ -0.59
RNF4-210ENST00000508235 L7N2F9 121 aa11.37□□□□□ -0.59
RNF4-210ENST00000508235 TSC22D2O75157 780 aa11.37□□□□□ -0.59
RNF4-210ENST00000508235 MBPP02686 304 aaPredicted RBP11.37□□□□□ -0.59
RNF4-210ENST00000508235 OR10J1P30954 320 aa11.37□□□□□ -0.59
RNF4-210ENST00000508235 YPEL3P61236 119 aaPredicted RBP11.37□□□□□ -0.59
RNF4-210ENST00000508235 VAMP2P63027 116 aa11.37□□□□□ -0.59
RNF4-210ENST00000508235 DEFB114Q30KQ6 69 aa11.37□□□□□ -0.59
RNF4-210ENST00000508235 ADAMTSL5Q6ZMM2 481 aa11.37□□□□□ -0.59
RNF4-210ENST00000508235 HAPLN4Q86UW8 402 aa11.37□□□□□ -0.59
RNF4-210ENST00000508235 NPIPB3Q92617 1050 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms