RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 RPRMLQ8N4K4 120 aa4.9□□□□□ -1.63
LINC01340-201ENST00000504012 OR51H1Q8NH63 302 aa4.9□□□□□ -1.63
LINC01340-201ENST00000504012 IL1F10Q8WWZ1 152 aa4.9□□□□□ -1.63
LINC01340-201ENST00000504012 RAB37Q96AX2 223 aa4.9□□□□□ -1.63
LINC01340-201ENST00000504012 ZC2HC1AQ96GY0 325 aa4.9□□□□□ -1.63
LINC01340-201ENST00000504012 C20orf78Q9BR46 151 aa4.9□□□□□ -1.63
LINC01340-201ENST00000504012 C1QTNF5Q9BXJ0 243 aa4.9□□□□□ -1.63
LINC01340-201ENST00000504012 RNASE7Q9H1E1 156 aaKnown RBP4.9□□□□□ -1.63
LINC01340-201ENST00000504012 IL36RNQ9UBH0 155 aa4.9□□□□□ -1.63
LINC01340-201ENST00000504012 DUSP13Q9UII6 198 aa4.9□□□□□ -1.63
LINC01340-201ENST00000504012 ERRFI1Q9UJM3 462 aaPredicted RBP4.9□□□□□ -1.63
LINC01340-201ENST00000504012 SIGLEC9Q9Y336 463 aa4.9□□□□□ -1.63
LINC01340-201ENST00000504012 MPC1Q9Y5U8 109 aa4.9□□□□□ -1.63
LINC01340-201ENST00000504012 SHANK1Q9Y566 2161 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 POLR2AP24928 1970 aaKnown RBP4.89□□□□□ -1.63
LINC01340-201ENST00000504012 TNRC6AQ8NDV7 1962 aaKnown RBP4.89□□□□□ -1.63
LINC01340-201ENST00000504012 RALGAPA1Q6GYQ0 2036 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 A0A1W2PQF6 199 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 TCRBV4S1A1TA0A5B7 111 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 SH2D7A6NKC9 451 aaPredicted RBP4.89□□□□□ -1.63
LINC01340-201ENST00000504012 C15orf62A8K5M9 175 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 A8MWL6 223 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 C15orf65H3BRN8 121 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 RRHO14718 337 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 MGST1P10620 155 aaKnown RBP4.89□□□□□ -1.63
LINC01340-201ENST00000504012 XGP55808 180 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 FGF12P61328 243 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 RPS28P62857 69 aaKnown RBP4.89□□□□□ -1.63
LINC01340-201ENST00000504012 PLP2Q04941 152 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 CATR1Q13166 79 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 PSG5Q15238 335 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 EFNB3Q15768 340 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 RRN3P1Q2M238 152 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 KRTAP27-1Q3LI81 207 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 PIGYQ3MUY2 71 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 C4orf48Q5BLP8 95 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 LYRM7Q5U5X0 104 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 SH2D6Q7Z4S9 175 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 PPP1R32Q7Z5V6 425 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 PPP1R27Q86WC6 154 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 BCL6BQ8N143 479 aaPredicted RBP4.89□□□□□ -1.63
LINC01340-201ENST00000504012 DDB2Q92466 427 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 RITA1Q96K30 269 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 LINC01600Q96MT4 127 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 PRELID3AQ96N28 172 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 SLC25A2Q9BXI2 301 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 NXF5Q9H1B4 397 aaKnown RBP4.89□□□□□ -1.63
LINC01340-201ENST00000504012 IL23AQ9NPF7 189 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 ZNF492Q9P255 531 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 B4GALT7Q9UBV7 327 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 LSM4Q9Y4Z0 139 aaKnown RBP4.89□□□□□ -1.63
LINC01340-201ENST00000504012 HILPDAQ9Y5L2 63 aa4.89□□□□□ -1.63
LINC01340-201ENST00000504012 CACNA1IQ9P0X4 2223 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 KIR2DS5A0A0G2JLQ3 304 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 A0A0G2JNG1 304 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 MANSC4A6NHS7 340 aaPredicted RBP4.88□□□□□ -1.63
LINC01340-201ENST00000504012 PRSS29PA6NIE9 313 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 PRSS46E5RG02 174 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 M0R135 149 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 MGST3O14880 152 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 SNAI2O43623 268 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 SPINK4O60575 86 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 NDUFS7O75251 213 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 IGLV2-14P01704 120 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 SLC25A5P05141 298 aaKnown RBP4.88□□□□□ -1.63
LINC01340-201ENST00000504012 ZNF688P0C7X2 276 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 IFITM1P13164 125 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 CRYGSP22914 178 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 ID1P41134 155 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 CXCL12P48061 93 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 FOXG1P55316 489 aaPredicted RBP4.88□□□□□ -1.63
LINC01340-201ENST00000504012 FOXA3P55318 350 aaPredicted RBP4.88□□□□□ -1.63
LINC01340-201ENST00000504012 EDDM3BP56851 147 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 RPL30P62888 115 aaKnown RBP4.88□□□□□ -1.63
LINC01340-201ENST00000504012 SRYQ05066 204 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 GAGE2BQ13066 116 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 FOXE3Q13461 319 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 KIR2DS5Q14953 304 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 DAZAP2Q15038 168 aaPredicted RBP4.88□□□□□ -1.63
LINC01340-201ENST00000504012 GAGE2EQ4V326 116 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 TTC32Q5I0X7 151 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 CFAP126Q5VTH2 177 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 TREML4Q6UXN2 200 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 FAM214BQ7L5A3 538 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 CEND1Q8N111 149 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 OR13H1Q8NG92 308 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 CYB5D2Q8WUJ1 264 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 ZNF799Q96GE5 643 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 SRSF8Q9BRL6 282 aaKnown RBP4.88□□□□□ -1.63
LINC01340-201ENST00000504012 PRSS22Q9GZN4 317 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 MDFICQ9P1T7 246 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 GAGE2DQ9UEU5 116 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 TP73-AS1Q9UF72 201 aa4.88□□□□□ -1.63
LINC01340-201ENST00000504012 CSDC2Q9Y534 153 aaKnown RBP4.88□□□□□ -1.63
LINC01340-201ENST00000504012 A0A1B0GX51 115 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 A0A1W2PPI3 338 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 SHISA8B8ZZ34 492 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 IGKV3-11P04433 115 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 BCL3P20749 454 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 KIR2DS2P43631 304 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms