RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 LAMA5O15230 3695 aa13.03□□□□□ -0.32
SEMA4D-220ENST00000492386 PPIAL4EA0A075B759 164 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 PPIAL4DF5H284 164 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 TNFRSF13BO14836 293 aaPredicted RBP13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 THBDP07204 575 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 PPIAL4FP0DN26 164 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 MGST1P10620 155 aaKnown RBP13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 CDKN1AP38936 164 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 BSPH1Q075Z2 132 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 LYPD2Q6UXB3 125 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 TEX43Q6ZNM6 134 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 PDPNQ86YL7 162 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 TGIF2LXQ8IUE1 241 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 OR10X1Q8NGY0 326 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 ZNF596Q8TC21 504 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 ST6GALNAC6Q969X2 333 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 CDC42EP3Q9UKI2 254 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 PPIAL4AQ9Y536 164 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 ZNF318Q5VUA4 2279 aa13.02□□□□□ -0.32
SEMA4D-220ENST00000492386 IGKV1D-37A0A075B6S9 117 aa13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 PYYP10082 97 aa13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 TDRG1Q3Y452 100 aa13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 FAM71F2Q6NXP2 309 aa13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 PATE2Q6UY27 113 aa13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 VSTM2AQ8TAG5 236 aa13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 H1FXQ92522 213 aaKnown RBP13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 LINC00479Q96M42 142 aa13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 ZNF430Q9H8G1 570 aaPredicted RBP13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 SAP30LQ9HAJ7 183 aa13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 ZNF355PQ9NSJ1 428 aa13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 AKAP13Q12802 2813 aa13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 ROS1P08922 2347 aa13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 SMG1Q96Q15 3661 aaKnown RBP13.02□□□□□ -0.33
SEMA4D-220ENST00000492386 FSTL3O95633 263 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 RPL19P84098 196 aaKnown RBP13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 COX19Q49B96 90 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 LINC00311Q8N616 119 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 C8orf31Q8N9H6 132 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 NHLRC2Q8NBF2 726 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 NPIPB3Q92617 1050 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 MRPL36Q9P0J6 103 aaKnown RBP13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 ZNF292O60281 2723 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 TCRBV4S1A1TA0A5B7 111 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 COX7A2P2O60397 106 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 IGHV3-48P01763 117 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 C10orf113Q5VZT2 155 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 TMEM186Q96B77 213 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 SAMD10Q9BYL1 202 aa13.01□□□□□ -0.33
SEMA4D-220ENST00000492386 AMY1AP04745 511 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 COMPP49747 757 aaPredicted RBP13□□□□□ -0.33
SEMA4D-220ENST00000492386 NUTF2P61970 127 aaKnown RBP13□□□□□ -0.33
SEMA4D-220ENST00000492386 KIAA1644Q3SXP7 199 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 THAP8Q8NA92 274 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 CCL17Q92583 94 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 WASHC3Q9Y3C0 194 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 AMMECR1Q9Y4X0 333 aaPredicted RBP13□□□□□ -0.33
SEMA4D-220ENST00000492386 RNF114Q9Y508 228 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 NDUFB3O43676 98 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 CA1P00915 261 aaPredicted RBP13□□□□□ -0.33
SEMA4D-220ENST00000492386 GPX1P07203 203 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 DLX6P56179 175 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 MRGPRG-AS1Q2M3A8 158 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 OR10J3Q5JRS4 329 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 MRPL54Q6P161 138 aaKnown RBP13□□□□□ -0.33
SEMA4D-220ENST00000492386 ZNF329Q86UD4 541 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 OR1L4Q8NGR5 311 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 FAM168AQ92567 244 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 C20orf144Q9BQM9 153 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 PAXXQ9BUH6 204 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 TPSG1Q9NRR2 321 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 SERTAD4Q9NUC0 356 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 CTSZQ9UBR2 303 aa13□□□□□ -0.33
SEMA4D-220ENST00000492386 BMPR1BO00238 502 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 RAB4AP20338 218 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 BRS3P32247 399 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 ZNF137PP52743 207 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 ASPHD1Q5U4P2 390 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 RITA1Q96K30 269 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 PLXNB1O43157 2135 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 ZGRF1Q86YA3 2104 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 IZUMO1RA6ND01 250 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 LOXP28300 417 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 SUB1P53999 127 aaKnown RBP eCLIP12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 LRRC10Q5BKY1 277 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 FXYD5Q96DB9 178 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 RCHY1Q96PM5 261 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 FBXL7Q9UJT9 491 aa12.99□□□□□ -0.33
SEMA4D-220ENST00000492386 A0A1W2PPI3 338 aa12.98□□□□□ -0.33
SEMA4D-220ENST00000492386 M0R143 59 aa12.98□□□□□ -0.33
SEMA4D-220ENST00000492386 KLK10O43240 276 aa12.98□□□□□ -0.33
SEMA4D-220ENST00000492386 SLC25A17O43808 307 aa12.98□□□□□ -0.33
SEMA4D-220ENST00000492386 HLA-DQA1P01909 254 aa12.98□□□□□ -0.33
SEMA4D-220ENST00000492386 SIGLECL1Q8N7X8 197 aa12.98□□□□□ -0.33
SEMA4D-220ENST00000492386 VN1R17PQ8TDU5 208 aa12.98□□□□□ -0.33
SEMA4D-220ENST00000492386 MBD6Q96DN6 1003 aa12.98□□□□□ -0.33
SEMA4D-220ENST00000492386 MAP1BP46821 2468 aaKnown RBP12.98□□□□□ -0.33
SEMA4D-220ENST00000492386 PEX7O00628 323 aa12.98□□□□□ -0.33
SEMA4D-220ENST00000492386 TDGF1P3P51864 188 aa12.98□□□□□ -0.33
SEMA4D-220ENST00000492386 BPIFB3P59826 476 aa12.98□□□□□ -0.33
SEMA4D-220ENST00000492386 ANKRD11Q6UB99 2663 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms