RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 A0A0J9YY10 115 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 TRBV6-4A0A1B0GX49 114 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 A0A1B0GX78 115 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 PQLC2LA1A4F0 135 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 BIRC5O15392 142 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 NUPR1O60356 82 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 TPM1P09493 284 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 UCHL3P15374 230 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 FOXA3P55318 350 aaPredicted RBP-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 PPP1R1AQ13522 171 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 GUK1Q16774 197 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 SPRNQ5BIV9 151 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 CST9Q5W186 159 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 CMTM5Q96DZ9 223 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 DIRAS2Q96HU8 199 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 KCTD7Q96MP8 289 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 WDR61Q9GZS3 305 aaKnown RBP-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 TNFSF18Q9UNG2 199 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 FLNAP21333 2647 aaKnown RBP-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 PCLOQ9Y6V0 5065 aa-0.25□□□□□ -2.45
CCDC93-209ENST00000488908 ZDBF2Q9HCK1 2354 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 MYO18AQ92614 2054 aaKnown RBP-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 MYO3BQ8WXR4 1341 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 IGHV1-58A0A0C4DH39 117 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 SMLR1H3BR10 107 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 CCL16O15467 120 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 YKT6O15498 198 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 IFNA10P01566 189 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 MYL12AP19105 171 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 MARCKSL1P49006 195 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 NKX2-5P52952 324 aaPredicted RBP-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 PMS2P3Q13401 168 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 RSU1Q15404 277 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 COQ5Q5HYK3 327 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 C6orf52Q5T4I8 152 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 AADACL4Q5VUY2 407 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 Q6ZS49 121 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 CLVS1Q8IUQ0 354 aaPredicted RBP-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 CLECL1Q8IZS7 167 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 SYCE1Q8N0S2 351 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 LRRC25Q8N386 305 aaPredicted RBP-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 DEFB125Q8N687 156 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 SIGLECL1Q8N7X8 197 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 TERB2Q8NHR7 220 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 MRPL30Q8TCC3 161 aaKnown RBP-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 DNAJC9Q8WXX5 260 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 MED29Q9NX70 200 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 C15orf41Q9Y2V0 281 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 ZANQ9Y493 2812 aa-0.26□□□□□ -2.45
CCDC93-209ENST00000488908 KMT2CQ8NEZ4 4911 aaKnown RBP-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 PFDN6O15212 129 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 KLF7O75840 302 aaPredicted RBP-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 MAP2K4P45985 399 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 DEFB113Q30KQ7 82 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 C12orf74Q32Q52 190 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 HAGHLQ6PII5 290 aaPredicted RBP-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 COMMD7Q86VX2 200 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 HIST3H2BBQ8N257 126 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 PSMF1Q92530 271 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 IMP4Q96G21 291 aaKnown RBP-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 SLC39A9Q9NUM3 307 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 C14orf105Q9NVL8 296 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 CHD3Q12873 2000 aaKnown RBP-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 HIVEP1P15822 2718 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 TAF1LQ8IZX4 1826 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 TTC28Q96AY4 2481 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 FAM208BQ5VWN6 2430 aa-0.27□□□□□ -2.45
CCDC93-209ENST00000488908 UBR5O95071 2799 aaPredicted RBP-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 NEBP20929 6669 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 SCN10AQ9Y5Y9 1956 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 PIK3R4Q99570 1358 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 RAD50Q92878 1312 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 C7orf71A4D174 169 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 F5H768 121 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 IGKV1-5P01602 117 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 OCMP0CE72 109 aaPredicted RBP-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 SPINT3P49223 89 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 HBA1P69905 142 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 QRFPP83859 136 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 OR13D1Q8NGV5 346 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 GPR146Q96CH1 333 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 C6orf62Q9GZU0 229 aaPredicted RBP-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 CHMP4BQ9H444 224 aaKnown RBP-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 MAP1LC3AQ9H492 121 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 TREM1Q9NP99 234 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 C14orf132Q9NPU4 83 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 ORMDL1Q9P0S3 153 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 C3orf18Q9UK00 162 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 ERGIC3Q9Y282 383 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 MUC2Q02817 5179 aa-0.28□□□□□ -2.45
CCDC93-209ENST00000488908 ZNF292O60281 2723 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 SBF1O95248 1867 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 KDM6AO15550 1401 aaPredicted RBP-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 TRPC5OSA6NMA1 111 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 APOEP02649 317 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 TYMSP04818 313 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 RPL12P30050 165 aaKnown RBP-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 LINC01554Q52M75 96 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 CDKL4Q5MAI5 379 aa-0.29□□□□□ -2.46
CCDC93-209ENST00000488908 CLVS2Q5SYC1 327 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms