RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 LHFPL4Q7Z7J7 247 aa12.14□□□□□ -0.47
TTC3-219ENST00000485402 KCNS1Q96KK3 526 aa12.14□□□□□ -0.47
TTC3-219ENST00000485402 GNB1LQ9BYB4 327 aa12.14□□□□□ -0.47
TTC3-219ENST00000485402 TRGV10A0A0A0MS01 117 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 TRAV5A0A0B4J249 113 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 J3QW42 95 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 CDC42EP3Q9UKI2 254 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 RNF24Q9Y225 148 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 YLPM1P49750 1951 aaKnown RBP12.13□□□□□ -0.47
TTC3-219ENST00000485402 CX3CL1P78423 397 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 STUMQ69YW2 141 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 TRAT1Q6PIZ9 186 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 RNASE8Q8TDE3 154 aaKnown RBP12.13□□□□□ -0.47
TTC3-219ENST00000485402 CLEC7AQ9BXN2 247 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 CXXC4Q9H2H0 198 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 PPP1R14DQ9NXH3 145 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 IQCF6A8MYZ5 107 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 CCL25O15444 150 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 CA7P43166 264 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 WDR73Q6P4I2 378 aa12.13□□□□□ -0.47
TTC3-219ENST00000485402 C1orf229Q6ZS94 237 aaPredicted RBP12.13□□□□□ -0.47
TTC3-219ENST00000485402 NDUFB8O95169 186 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 ADH4P08319 380 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 SLAQ13239 276 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 PMCHL1Q16048 86 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 ZNF439Q8NDP4 499 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 TSKUQ8WUA8 353 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 SLC45A2Q9UMX9 530 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 PLAUP00749 431 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 RPL8P62917 257 aaKnown RBP12.12□□□□□ -0.47
TTC3-219ENST00000485402 OR4A47Q6IF82 309 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 TCTEX1D1Q8N7M0 179 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 Q8N976 141 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 OR9G1Q8NH87 305 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 TET2Q6N021 2002 aaPredicted RBP12.12□□□□□ -0.47
TTC3-219ENST00000485402 M0R2Z0 102 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 CD24P25063 80 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 TNXAQ16473 311 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 ZNRD1Q9P1U0 126 aa12.12□□□□□ -0.47
TTC3-219ENST00000485402 PRRX1P54821 245 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 MSMPQ1L6U9 139 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 ETFRF1Q6IPR1 90 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 GGTLC3B5MD39 225 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 C15orf65H3BRN8 121 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 KLHDC1Q8N7A1 406 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 PRR7Q8TB68 274 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 ANKHD1Q8IWZ3 2542 aaKnown RBP12.11□□□□□ -0.47
TTC3-219ENST00000485402 PLXNB1O43157 2135 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 A0A1W2PN81 502 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 J3QR06 171 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 M0QZ24 198 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 CD40P25942 277 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 VAMP3Q15836 100 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 NIT1Q86X76 327 aa12.11□□□□□ -0.47
TTC3-219ENST00000485402 LSM4Q9Y4Z0 139 aaKnown RBP12.11□□□□□ -0.47
TTC3-219ENST00000485402 C9JCJ5 164 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 AMY1AP04745 511 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 ESDP10768 282 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 HSPE1P61604 102 aaKnown RBP12.1□□□□□ -0.47
TTC3-219ENST00000485402 TMEM108Q6UXF1 575 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 FAM169BQ8N8A8 192 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 TECRQ9NZ01 308 aaKnown RBP12.1□□□□□ -0.47
TTC3-219ENST00000485402 OR51B2Q9Y5P1 312 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 SH2D7A6NKC9 451 aaPredicted RBP12.1□□□□□ -0.47
TTC3-219ENST00000485402 PRB4P10163 310 aaPredicted RBP12.1□□□□□ -0.47
TTC3-219ENST00000485402 FOXA3P55318 350 aaPredicted RBP12.1□□□□□ -0.47
TTC3-219ENST00000485402 TMEM249Q2WGJ8 235 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 OR2D3Q8NGH3 330 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 OR4S2Q8NH73 311 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 HES4Q9HCC6 221 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 CLEC5AQ9NY25 188 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 BET1LQ9NYM9 111 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 PRSS46E5RG02 174 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 MT-ND6P03923 174 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 UBE2L3P68036 154 aaKnown RBP12.1□□□□□ -0.47
TTC3-219ENST00000485402 MCRIP2Q9BUT9 160 aaKnown RBP12.1□□□□□ -0.47
TTC3-219ENST00000485402 EPG5Q9HCE0 2579 aa12.1□□□□□ -0.47
TTC3-219ENST00000485402 SPRY3O43610 288 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 PYYP10082 97 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 TMEM167BQ9NRX6 74 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 ARL2-SNX15V9GYD0 113 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 LOC102724200A0A096LPH7 203 aaPredicted RBP12.09□□□□□ -0.47
TTC3-219ENST00000485402 AREGP15514 252 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 TSPOP30536 169 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 OR10W1Q8NGF6 305 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 TRAV9-1A0A075B6T8 112 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 IGKV1OR2-108A0A075B7D4 117 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 TRBV9A0A0B4J1U6 114 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 HLA-DQA1P01909 254 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 LINC00869P0C866 280 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 GRNP28799 593 aaKnown RBP12.09□□□□□ -0.47
TTC3-219ENST00000485402 CTRLP40313 264 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 BSPH1Q075Z2 132 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 MORN5Q5VZ52 161 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 LEMD1Q68G75 181 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 LINC01560Q8TB33 94 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 JKAMPQ9P055 326 aa12.09□□□□□ -0.47
TTC3-219ENST00000485402 THBDP07204 575 aa12.08□□□□□ -0.48
TTC3-219ENST00000485402 KLF3P57682 345 aaPredicted RBP12.08□□□□□ -0.48
TTC3-219ENST00000485402 MOGAT3Q86VF5 341 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms