RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 IGLV11-55A0A075B6I3 123 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 TCRBV4S1A1TA0A5B7 111 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 I3L2K1 104 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 ATP6V0E1O15342 81 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 MT-CO2P00403 227 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 AMY1AP04745 511 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 LINC00869P0C866 280 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 EGR2P11161 476 aaPredicted RBP7.4□□□□□ -1.22
VPS52-216ENST00000471309 OR10J1P30954 320 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 CDC34P49427 236 aaPredicted RBP7.4□□□□□ -1.22
VPS52-216ENST00000471309 RND2P52198 227 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 CRIP2P52943 208 aaPredicted RBP7.4□□□□□ -1.22
VPS52-216ENST00000471309 SELENOTP62341 195 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 MLANAQ16655 118 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 KLK9Q2XQG4 91 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.22
VPS52-216ENST00000471309 CYP2G1PQ6ZSU1 146 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 SSX7Q7RTT5 188 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 TMEM219Q86XT9 240 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 CIARTQ8N365 385 aaPredicted RBP7.4□□□□□ -1.22
VPS52-216ENST00000471309 TMEM116Q8NCL8 245 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 FAM110DQ8TAY7 271 aaPredicted RBP7.4□□□□□ -1.22
VPS52-216ENST00000471309 SFT2D1Q8WV19 159 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 TMEM68Q96MH6 324 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 PBDC1Q9BVG4 233 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 SLC25A22Q9H936 323 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 MRPL36Q9P0J6 103 aaKnown RBP7.4□□□□□ -1.22
VPS52-216ENST00000471309 KLK9Q9UKQ9 250 aa7.4□□□□□ -1.22
VPS52-216ENST00000471309 SPG11Q96JI7 2443 aa7.4□□□□□ -1.23
VPS52-216ENST00000471309 IGKV1D-37A0A075B6S9 117 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 MDFIC2A0A1B0GVS7 189 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 K7EIM0 57 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 CD5P06127 495 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 CCL20P78556 96 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 SRSF3P84103 164 aaKnown RBP7.39□□□□□ -1.23
VPS52-216ENST00000471309 DEFB112Q30KQ8 113 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 AKIRIN2Q53H80 203 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 GCSAMLQ5JQS6 135 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 FAM122CQ6P4D5 195 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 LCN15Q6UWW0 184 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 BCL6BQ8N143 479 aaPredicted RBP7.39□□□□□ -1.23
VPS52-216ENST00000471309 BPIFCQ8NFQ6 507 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 OR4X1Q8NH49 305 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 OR5R1Q8NH85 324 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 NPIPB3Q92617 1050 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 RAB24Q969Q5 203 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 ZNF48Q96MX3 618 aaPredicted RBP7.39□□□□□ -1.23
VPS52-216ENST00000471309 LINC00052Q96N35 136 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 TRGV9Q99603 122 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 C19orf24Q9BVV8 132 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 SCRT1Q9BWW7 348 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 SMDT1Q9H4I9 107 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 WNK2Q9Y3S1 2297 aa7.39□□□□□ -1.23
VPS52-216ENST00000471309 NAV3Q8IVL0 2385 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 A0A1B0GV50 99 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 A0A1W2PPV4 95 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 ZFP92A6NM28 416 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 IFNA1P01562 189 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 HIST1H1BP16401 226 aaKnown RBP7.38□□□□□ -1.23
VPS52-216ENST00000471309 IER3P46695 156 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 RHOBP62745 196 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 PMS2P11Q13670 270 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 PEA15Q15121 130 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 LY6EQ16553 131 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 GUK1Q16774 197 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 ECSCRQ19T08 205 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 C19orf54Q5BKX5 351 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 UNQ5815/PRO19632Q6UWF5 114 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 NARS2Q96I59 477 aaKnown RBP7.38□□□□□ -1.23
VPS52-216ENST00000471309 FANCD2OSQ96PS1 177 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 PRDM13Q9H4Q3 707 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 TREM1Q9NP99 234 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 TNFRSF19Q9NS68 423 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 THYN1Q9P016 225 aa7.38□□□□□ -1.23
VPS52-216ENST00000471309 LOC102723971A0A1B0GUV8 181 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 TMEM218A2RU14 115 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 PSMB11A5LHX3 300 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 RBFOX3A6NFN3 312 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 SH2D7A6NKC9 451 aaPredicted RBP7.37□□□□□ -1.23
VPS52-216ENST00000471309 CLN5O75503 358 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 IGHV3-48P01763 117 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 IGHV4-59P01825 116 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 IGHG2P01859 326 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 IGF1P05019 195 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 IGLC1P0CG04 106 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 STAG3L2P0CL84 134 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 STAG3L3P0CL85 134 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 FGF8P55075 233 aaPredicted RBP7.37□□□□□ -1.23
VPS52-216ENST00000471309 KRTAP1-1Q07627 177 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 ZNF506Q5JVG8 444 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 Q6YL49 198 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 RNF2Q99496 336 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 MRPL32Q9BYC8 188 aaKnown RBP7.37□□□□□ -1.23
VPS52-216ENST00000471309 EIF5A2Q9GZV4 153 aaKnown RBP7.37□□□□□ -1.23
VPS52-216ENST00000471309 TMEM231Q9H6L2 316 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 ZNF580Q9UK33 172 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 POLQO75417 2590 aa7.37□□□□□ -1.23
VPS52-216ENST00000471309 CSMD2Q7Z408 3487 aa7.36□□□□□ -1.23
VPS52-216ENST00000471309 TRBV9A0A0B4J1U6 114 aa7.36□□□□□ -1.23
VPS52-216ENST00000471309 IGHV3-21A0A0B4J1V1 117 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms