RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ERHP84090 104 aaKnown RBP11.63□□□□□ -0.55
HDAC6-213ENST00000462730 PAX2Q02962 417 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 PSG5Q15238 335 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 MRGPRG-AS1Q2M3A8 158 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 BSXQ3C1V8 233 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 ACOT6Q3I5F7 207 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-213ENST00000462730 C1orf122Q6ZSJ8 110 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 ABHD5Q8WTS1 349 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 FRZBQ92765 325 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 GGTLC1Q9BX51 225 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 SDF2L1Q9HCN8 221 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 NPVFQ9HCQ7 196 aa11.63□□□□□ -0.55
HDAC6-213ENST00000462730 TRBV24-1A0A075B6N3 115 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 IGHV2-70DA0A0C4DH43 119 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 CTXND1A0A1B0GTU2 59 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 J3QKU1 62 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 NDUFS8O00217 210 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 TIMM23O14925 209 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 CRYGBP07316 175 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 CEACAM3P40198 252 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 PRSS8Q16651 343 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 PDZD11Q5EBL8 140 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 LHFPL4Q7Z7J7 247 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 C1orf159Q96HA4 380 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 ACTR3CQ9C0K3 210 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-213ENST00000462730 VAX2Q9UIW0 290 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 HILPDAQ9Y5L2 63 aa11.62□□□□□ -0.55
HDAC6-213ENST00000462730 INS-IGF2F8WCM5 200 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 HOXB4P17483 251 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-213ENST00000462730 OPRK1P41145 380 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 MMD2Q8IY49 270 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 LSM4Q9Y4Z0 139 aaKnown RBP11.61□□□□□ -0.55
HDAC6-213ENST00000462730 IGHV4-30-2A0A087WSY4 118 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 NBPF19A0A087WUL8 3843 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 IGHV4-61A0A0C4DH41 118 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 VWC2LB2RUY7 222 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 FNDC10F2Z333 226 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 PHOX2AO14813 284 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 HMGB3O15347 200 aaKnown RBP11.61□□□□□ -0.55
HDAC6-213ENST00000462730 WT1-ASQ06250 92 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 PMS2P11Q13670 270 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 TNXAQ16473 311 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 MIC13Q5XKP0 118 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 TEPPQ6URK8 271 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 SSX3Q99909 188 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 SIGLEC9Q9Y336 463 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 PXMP4Q9Y6I8 212 aa11.61□□□□□ -0.55
HDAC6-213ENST00000462730 SPG11Q96JI7 2443 aa11.6□□□□□ -0.55
HDAC6-213ENST00000462730 TENM4Q6N022 2769 aa11.6□□□□□ -0.55
HDAC6-213ENST00000462730 SOX15O60248 233 aa11.6□□□□□ -0.55
HDAC6-213ENST00000462730 VENTXO95231 258 aa11.6□□□□□ -0.55
HDAC6-213ENST00000462730 IFNA1P01562 189 aa11.6□□□□□ -0.55
HDAC6-213ENST00000462730 PCP4P48539 62 aa11.6□□□□□ -0.55
HDAC6-213ENST00000462730 GCSAMLQ5JQS6 135 aa11.6□□□□□ -0.55
HDAC6-213ENST00000462730 SSMEM1Q8WWF3 244 aa11.6□□□□□ -0.55
HDAC6-213ENST00000462730 SIRPDQ9H106 197 aa11.6□□□□□ -0.55
HDAC6-213ENST00000462730 LPAR2Q9HBW0 351 aa11.6□□□□□ -0.55
HDAC6-213ENST00000462730 KCNIP2Q9NS61 270 aa11.6□□□□□ -0.55
HDAC6-213ENST00000462730 USP9YO00507 2555 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-213ENST00000462730 FOXH1O75593 365 aa11.59□□□□□ -0.55
HDAC6-213ENST00000462730 ACTL6BO94805 426 aa11.59□□□□□ -0.55
HDAC6-213ENST00000462730 DEFA4P12838 97 aa11.59□□□□□ -0.55
HDAC6-213ENST00000462730 FABP4P15090 132 aa11.59□□□□□ -0.55
HDAC6-213ENST00000462730 RPL27AP46776 148 aaKnown RBP11.59□□□□□ -0.55
HDAC6-213ENST00000462730 CDC34P49427 236 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-213ENST00000462730 GNB1P62873 340 aa11.59□□□□□ -0.55
HDAC6-213ENST00000462730 SVIPQ8NHG7 77 aa11.59□□□□□ -0.55
HDAC6-213ENST00000462730 CFHR4Q92496 578 aa11.59□□□□□ -0.55
HDAC6-213ENST00000462730 RNF5Q99942 180 aa11.59□□□□□ -0.55
HDAC6-213ENST00000462730 FBXL15Q9H469 300 aa11.59□□□□□ -0.55
HDAC6-213ENST00000462730 RAB31Q13636 194 aa11.59□□□□□ -0.55
HDAC6-213ENST00000462730 JOSD1Q15040 202 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-213ENST00000462730 COA6Q5JTJ3 125 aaKnown RBP11.59□□□□□ -0.55
HDAC6-213ENST00000462730 ABCA2Q9BZC7 2435 aa11.58□□□□□ -0.55
HDAC6-213ENST00000462730 REG1AP05451 166 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 COMPP49747 757 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-213ENST00000462730 SUB1P53999 127 aaKnown RBP eCLIP11.58□□□□□ -0.56
HDAC6-213ENST00000462730 KRTAP10-9P60411 292 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 CD69Q07108 199 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 PLGLAQ15195 96 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 PPP1R27Q86WC6 154 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 MRPL41Q8IXM3 137 aaKnown RBP11.58□□□□□ -0.56
HDAC6-213ENST00000462730 IGLC7A0M8Q6 106 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 TOX4O94842 621 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 GCGP01275 180 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 GAMTQ14353 236 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 MLANAQ16655 118 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 TMEM144Q7Z5S9 345 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 MRPL52Q86TS9 123 aaKnown RBP11.58□□□□□ -0.56
HDAC6-213ENST00000462730 TMEM183AQ8IXX5 376 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 STPG3Q8N7X2 389 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 BTF3L4Q96K17 158 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 PACRGQ96M98 296 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-213ENST00000462730 NAT8Q9UHE5 227 aa11.58□□□□□ -0.56
HDAC6-213ENST00000462730 LGALS4P56470 323 aa11.57□□□□□ -0.56
HDAC6-213ENST00000462730 MEF2BQ02080 365 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-213ENST00000462730 MMDQ15546 238 aa11.57□□□□□ -0.56
HDAC6-213ENST00000462730 MINOS1Q5TGZ0 78 aa11.57□□□□□ -0.56
HDAC6-213ENST00000462730 CYP2G1PQ6ZSU1 146 aa11.57□□□□□ -0.56
HDAC6-213ENST00000462730 ACY3Q96HD9 319 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms