RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 C14orf144Q96I85 54 aa1.91□□□□□ -2.1
VPS8-211ENST00000452140 LXNQ9BS40 222 aa1.91□□□□□ -2.1
VPS8-211ENST00000452140 ALX4Q9H161 411 aaPredicted RBP1.91□□□□□ -2.1
VPS8-211ENST00000452140 MED28Q9H204 178 aa1.91□□□□□ -2.1
VPS8-211ENST00000452140 FAM96AQ9H5X1 160 aa1.91□□□□□ -2.1
VPS8-211ENST00000452140 NIT2Q9NQR4 276 aa1.91□□□□□ -2.1
VPS8-211ENST00000452140 CISHQ9NSE2 258 aa1.91□□□□□ -2.1
VPS8-211ENST00000452140 UQCC1Q9NVA1 299 aa1.91□□□□□ -2.1
VPS8-211ENST00000452140 ASF1BQ9NVP2 202 aa1.91□□□□□ -2.1
VPS8-211ENST00000452140 MRPL27Q9P0M9 148 aaKnown RBP1.91□□□□□ -2.1
VPS8-211ENST00000452140 ANAPC10Q9UM13 185 aa1.91□□□□□ -2.1
VPS8-211ENST00000452140 ICOSQ9Y6W8 199 aa1.91□□□□□ -2.1
VPS8-211ENST00000452140 COL24A1Q17RW2 1714 aa1.91□□□□□ -2.1
VPS8-211ENST00000452140 SCN9AQ15858 1988 aa1.9□□□□□ -2.1
VPS8-211ENST00000452140 THSD7AQ9UPZ6 1657 aa1.9□□□□□ -2.1
VPS8-211ENST00000452140 COL1A1P02452 1464 aaPredicted RBP1.9□□□□□ -2.11
VPS8-211ENST00000452140 MYLKQ15746 1914 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 IGHV1-45A0A0A0MS14 117 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 hADV38S2A0JD32 116 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 KNCNA6PVL3 124 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 G3V3Q6 166 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 H3BQ85 93 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 GPR31O00270 319 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 HMGB3O15347 200 aaKnown RBP1.9□□□□□ -2.11
VPS8-211ENST00000452140 DEDDO75618 318 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 GPR75O95800 540 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 IGHMP01871 453 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 IFNA4P05014 189 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 HLA-DQB2P05538 268 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 BPGMP07738 259 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 SMIM6P0DI80 62 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 CYBAP13498 195 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 HIST1H1TP22492 207 aaPredicted RBP1.9□□□□□ -2.11
VPS8-211ENST00000452140 CRHBPP24387 322 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 PPP1CCP36873 323 aaKnown RBP1.9□□□□□ -2.11
VPS8-211ENST00000452140 ETV6P41212 452 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 INPP1P49441 399 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 RPS20P60866 119 aaKnown RBP1.9□□□□□ -2.11
VPS8-211ENST00000452140 RAB4BP61018 213 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 HIST1H3AP68431 136 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 H3F3AP84243 136 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 PDGFRLQ15198 375 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 TSNQ15631 228 aaKnown RBP1.9□□□□□ -2.11
VPS8-211ENST00000452140 ZNF141Q15928 474 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 KRTAP25-1Q3LHN0 102 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 HSD17B12Q53GQ0 312 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 PYCR3Q53H96 274 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 PYDC2Q56P42 97 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 TEX261Q6UWH6 196 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 LINC00299Q6ZSB3 139 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 CTAGE3PQ8IX95 158 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 BAP18Q8IXM2 172 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 C1orf174Q8IYL3 243 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 ANKRD29Q8N6D5 301 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 PACRGLQ8N7B6 248 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 OR52L1Q8NGH7 329 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 OR10J5Q8NHC4 309 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 JOSD2Q8TAC2 188 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 CANT1Q8WVQ1 401 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 BORCS7Q96B45 105 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 GALMQ96C23 342 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 MRPS24Q96EL2 167 aaKnown RBP1.9□□□□□ -2.11
VPS8-211ENST00000452140 ABHD14BQ96IU4 210 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 OR52E6Q96RD3 313 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 TM2D3Q9BRN9 247 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 GINS3Q9BRX5 216 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 DDA1Q9BW61 102 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 DUSP21Q9H596 190 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 MED29Q9NX70 200 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 COQ4Q9Y3A0 265 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 U3KQ87 197 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 DDX60LQ5H9U9 1706 aaKnown RBP1.9□□□□□ -2.11
VPS8-211ENST00000452140 DOT1LQ8TEK3 1739 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 ANKRD31Q8N7Z5 1873 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 LTN1O94822 1766 aa1.9□□□□□ -2.11
VPS8-211ENST00000452140 ALPK3Q96L96 1907 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 DUOX1Q9NRD9 1551 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 BTAF1O14981 1849 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 SLX4Q8IY92 1834 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 UBR1Q8IWV7 1749 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 SHROOM3Q8TF72 1996 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 NHSL1Q5SYE7 1610 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 PRORSD1PA6NEY8 169 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 EFCAB10A6NFE3 127 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 RFPL4AA6NLU0 287 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 PPP5D1E7EU14 171 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 RFPL4AL1F8VTS6 287 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 PLA2G10O15496 165 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 TPST1O60507 370 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 GADD45GO95257 159 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 OPN1SWP03999 348 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 CRHP06850 196 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 CRYGDP07320 174 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 GUSBP08236 651 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 SPI1P17947 270 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 S100PP25815 95 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 S100GP29377 79 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 CRABP1P29762 137 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 PSMD8P48556 350 aa1.89□□□□□ -2.11
VPS8-211ENST00000452140 DAPP51397 102 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms