RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 ESPL1Q14674 2120 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 PMCHL1Q16048 86 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 MRPL23Q16540 153 aaKnown RBP6.63□□□□□ -1.35
VTI1A-202ENST00000432306 LINC01620Q4KN68 170 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 ZNF474Q6S9Z5 364 aaPredicted RBP6.63□□□□□ -1.35
VTI1A-202ENST00000432306 RASL11AQ6T310 242 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 TCF23Q7RTU1 214 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 LRP11Q86VZ4 500 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 SIGLECL1Q8N7X8 197 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 OR2M7Q8NG81 312 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 MRAPQ8TCY5 172 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 MRGPRDQ8TDS7 321 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 VN1R17PQ8TDU5 208 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 KCNS1Q96KK3 526 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 DERL1Q9BUN8 251 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 MAP1LC3CQ9BXW4 147 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 HES4Q9HCC6 221 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 CLN8Q9UBY8 286 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 V9GYV3 84 aa6.63□□□□□ -1.35
VTI1A-202ENST00000432306 SDK2Q58EX2 2172 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 IGHV2-26A0A0B4J1V2 119 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 PPIAL4CA0A0B4J2A2 164 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 IGHV2-70DA0A0C4DH43 119 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 A0A0G2JNJ9 132 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 DIRC3C9JPN6 131 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 FNDC10F2Z333 226 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 NTN3O00634 580 aaPredicted RBP6.62□□□□□ -1.35
VTI1A-202ENST00000432306 HMGB3O15347 200 aaKnown RBP6.62□□□□□ -1.35
VTI1A-202ENST00000432306 CCL25O15444 150 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 ZG16O60844 167 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 PPIAL4GP0DN37 164 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 GP9P14770 177 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 CBLN1P23435 193 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 SSR4P51571 173 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 IGFBP7Q16270 282 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 TEPPQ6URK8 271 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 STPG4Q8N801 248 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 OR4P4Q8NGL7 312 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 SGK494Q96LW2 274 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 PATZ1Q9HBE1 687 aaKnown RBP6.62□□□□□ -1.35
VTI1A-202ENST00000432306 OSTCQ9NRP0 149 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 Q9UFV3 132 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 PPP1R3CQ9UQK1 317 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 YLPM1P49750 1951 aaKnown RBP6.62□□□□□ -1.35
VTI1A-202ENST00000432306 IGHV2OR16-5A0A0B4J2B6 119 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 K7EN84 100 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 TCF21O43680 179 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 WDR1O75083 606 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 ZNF324O75467 553 aaPredicted RBP6.62□□□□□ -1.35
VTI1A-202ENST00000432306 S1PR2O95136 353 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 HLA-DQA1P01909 254 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 COX6A1P12074 109 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 RIPPLY3P57055 190 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 PSG7Q13046 419 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 SRSF6Q13247 344 aaKnown RBP6.62□□□□□ -1.35
VTI1A-202ENST00000432306 RPEL1Q2QD12 228 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 HLA-DRB5Q30154 266 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 SPATA45Q537H7 98 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 VWA1Q6PCB0 445 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 BAGE3Q86Y29 109 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 BAGE2Q86Y30 109 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 MMD2Q8IY49 270 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 STXBP6Q8NFX7 210 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 STARD4Q96DR4 205 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 MCRIP2Q9BUT9 160 aaKnown RBP6.62□□□□□ -1.35
VTI1A-202ENST00000432306 SAMD10Q9BYL1 202 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 SAP30LQ9HAJ7 183 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 GNB4Q9HAV0 340 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 NRN1Q9NPD7 142 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 C1RLQ9NZP8 487 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 FOXJ2Q9P0K8 574 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 COX11Q9Y6N1 276 aa6.62□□□□□ -1.35
VTI1A-202ENST00000432306 ITPR2Q14571 2701 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 SEC16AO15027 2179 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 IGHV1-69-2A0A0G2JMI3 117 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 A0A1W2PR80 420 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 A0A1W2PS18 150 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 SNURFLB1AK76 121 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 FCN1O00602 326 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 RBMXL2O75526 392 aaKnown RBP6.61□□□□□ -1.35
VTI1A-202ENST00000432306 NEURL1O76050 574 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 OR2H2O95918 312 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 MT-CO2P00403 227 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 ARR3P36575 388 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 RHOGP84095 191 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 MMDQ15546 238 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 HIST2H2BCQ6DN03 193 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 HIST2H2BDQ6DRA6 164 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 TMEM136Q6ZRR5 245 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 NIT1Q86X76 327 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 STPG3Q8N7X2 389 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 ZNF738Q8NE65 137 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 OR1L6Q8NGR2 347 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 OR10D3Q8NH80 312 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 FAM222BQ8WU58 562 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 GGTLC1Q9BX51 225 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 LOXL2Q9Y4K0 774 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 RNF114Q9Y508 228 aa6.61□□□□□ -1.35
VTI1A-202ENST00000432306 TRGV8A0A0C4DH27 118 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 SCO2A0A1W2PP80 73 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms