RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 SPRNQ5BIV9 151 aa13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 OR10W1Q8NGF6 305 aa13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 CST9LQ9H4G1 147 aa13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 KLF13Q9Y2Y9 288 aaPredicted RBP13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 SRRM4A7MD48 611 aaKnown RBP13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 FNDC10F2Z333 226 aa13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 IGKV1-16P04430 117 aa13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 BVES-AS1Q5T3Y7 98 aa13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 FAM231DQ6ZW35 169 aa13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 TCF24Q7RTU0 167 aa13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 VPS25Q9BRG1 176 aa13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 GSX1Q9H4S2 264 aaPredicted RBP13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 CADP27708 2225 aa13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 HEATR1Q9H583 2144 aaKnown RBP13.56□□□□□ -0.24
NPC1L1-203ENST00000423141 PSMB11A5LHX3 300 aa13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 PPBPP02775 128 aa13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 ZNF329Q86UD4 541 aa13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 ZNRD1Q9P1U0 126 aa13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 ICE1Q9Y2F5 2266 aa13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 IGHV1-24A0A0C4DH33 117 aa13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 MGST3O14880 152 aa13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 DUSP3P51452 185 aaPredicted RBP13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 PRCDQ00LT1 54 aa13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 OR2Z1Q8NG97 314 aa13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 ZC2HC1AQ96GY0 325 aa13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 NAV3Q8IVL0 2385 aa13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 DCHS1Q96JQ0 3298 aa13.55□□□□□ -0.24
NPC1L1-203ENST00000423141 PEX7O00628 323 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 OCIAD2Q56VL3 154 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 AMMECR1LQ6DCA0 310 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 SIT1Q9Y3P8 196 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 SVILO95425 2214 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 LOC102724200A0A096LPH7 203 aaPredicted RBP13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 A0A1B0GXF2 115 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 SYS1-DBNDD2H3BUS1 97 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 IGHV3-48P01763 117 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 CD46P15529 392 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 S100A7P31151 101 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 RTL8BQ17RB0 113 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 C17orf58Q2M2W7 97 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 SSX8Q7RTT4 187 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 C7orf69Q9H7B7 122 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 ST20Q9HBF5 79 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 ABI3Q9P2A4 366 aa13.54□□□□□ -0.24
NPC1L1-203ENST00000423141 TEX50A0A1B0GTY4 177 aa13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 PLAUP00749 431 aa13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 FAM201AQ5SY85 155 aa13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 INO80CQ6PI98 192 aaPredicted RBP13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 DUX4L9Q6RFH8 374 aaPredicted RBP13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 CRXO43186 299 aaPredicted RBP13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 CECR9P0C854 216 aa13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 RNASE2P10153 161 aaKnown RBP13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 FOXE3Q13461 319 aa13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 CR1LQ2VPA4 569 aa13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 LINC00322Q6ZN03 302 aaPredicted RBP13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 LHFPL4Q7Z7J7 247 aa13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 GCSAMQ8N6F7 178 aa13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 PRNDQ9UKY0 176 aa13.53□□□□□ -0.24
NPC1L1-203ENST00000423141 DSCAMO60469 2012 aa13.52□□□□□ -0.24
NPC1L1-203ENST00000423141 SRRM5B3KS81 715 aa13.52□□□□□ -0.24
NPC1L1-203ENST00000423141 H0Y8G0 127 aa13.52□□□□□ -0.24
NPC1L1-203ENST00000423141 IGKV3-15P01624 115 aa13.52□□□□□ -0.24
NPC1L1-203ENST00000423141 DEFB125Q8N687 156 aa13.52□□□□□ -0.24
NPC1L1-203ENST00000423141 C19orf24Q9BVV8 132 aa13.52□□□□□ -0.24
NPC1L1-203ENST00000423141 TRGV5A0A0B4J1U4 118 aa13.52□□□□□ -0.25
NPC1L1-203ENST00000423141 C9orf172C9J069 976 aa13.52□□□□□ -0.25
NPC1L1-203ENST00000423141 UPK2O00526 184 aa13.52□□□□□ -0.25
NPC1L1-203ENST00000423141 ZNF138P52744 262 aa13.52□□□□□ -0.25
NPC1L1-203ENST00000423141 CD69Q07108 199 aa13.52□□□□□ -0.25
NPC1L1-203ENST00000423141 SLC25A34Q6PIV7 304 aa13.52□□□□□ -0.25
NPC1L1-203ENST00000423141 PAXXQ9BUH6 204 aa13.52□□□□□ -0.25
NPC1L1-203ENST00000423141 C2orf83Q53S99 150 aa13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 CNEP1R1Q8N9A8 125 aa13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 PMCHL2Q9BQD1 86 aa13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 RPH3ALQ9UNE2 315 aa13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 A0A087X0K7 114 aa13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 LEPROTL1O95214 131 aa13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 CGB3P0DN86 165 aa13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 CGB7P0DN87 165 aa13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 ZNF137PP52743 207 aa13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 MSMPQ1L6U9 139 aa13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 HES3Q5TGS1 186 aa13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 PATE2Q6UY27 113 aa13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 MRPL32Q9BYC8 188 aaKnown RBP13.51□□□□□ -0.25
NPC1L1-203ENST00000423141 KLRC4-KLRK1H3BQV0 150 aa13.5□□□□□ -0.25
NPC1L1-203ENST00000423141 HIST1H1EP10412 219 aaKnown RBP13.5□□□□□ -0.25
NPC1L1-203ENST00000423141 PSG9Q00887 426 aa13.5□□□□□ -0.25
NPC1L1-203ENST00000423141 MDS2Q8NDY4 140 aa13.5□□□□□ -0.25
NPC1L1-203ENST00000423141 GTSF1Q8WW33 167 aa13.5□□□□□ -0.25
NPC1L1-203ENST00000423141 CFAP47Q6ZTR5 3102 aa13.5□□□□□ -0.25
NPC1L1-203ENST00000423141 COX7A2P2O60397 106 aa13.5□□□□□ -0.25
NPC1L1-203ENST00000423141 HBBP68871 147 aa13.5□□□□□ -0.25
NPC1L1-203ENST00000423141 RND1Q92730 232 aa13.5□□□□□ -0.25
NPC1L1-203ENST00000423141 ZNF257Q9Y2Q1 563 aa13.5□□□□□ -0.25
NPC1L1-203ENST00000423141 DSCAML1Q8TD84 2053 aa13.49□□□□□ -0.25
NPC1L1-203ENST00000423141 E7EUB6 86 aa13.49□□□□□ -0.25
NPC1L1-203ENST00000423141 POU2AF1Q16633 256 aa13.49□□□□□ -0.25
NPC1L1-203ENST00000423141 Q6ZT83 130 aa13.49□□□□□ -0.25
NPC1L1-203ENST00000423141 FXYD5Q96DB9 178 aa13.49□□□□□ -0.25
NPC1L1-203ENST00000423141 PGLYRP4Q96LB8 373 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms