RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 TMEM133Q9H2Q1 129 aa3.09□□□□□ -1.91
CLHC1-201ENST00000401408 TCEAL2Q9H3H9 227 aaPredicted RBP3.09□□□□□ -1.91
CLHC1-201ENST00000401408 AP4S1Q9Y587 144 aa3.09□□□□□ -1.91
CLHC1-201ENST00000401408 KCNE3Q9Y6H6 103 aa3.09□□□□□ -1.91
CLHC1-201ENST00000401408 PHF3Q92576 2039 aaKnown RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 TRBV5-3A0A0A0MS03 114 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 IGLV9-49A0A0B4J1Y8 123 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 GGT3PA6NGU5 568 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 GGTLC3B5MD39 225 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 CCDC179H3BU77 68 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 J3QRK9 145 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 PDCD5O14737 125 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 SS18L1O75177 396 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 TNFSF13O75888 250 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 CD48P09326 243 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 PGAM2P15259 253 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 IL2RGP31785 369 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 TGFBR1P36897 503 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 KLK7P49862 253 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 SELENOPP49908 381 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 SLC25A1P53007 311 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 HOXC5Q00444 222 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 PEA15Q15121 130 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 FAM222AQ5U5X8 452 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 C9orf57Q5W0N0 161 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 ZNF773Q6PK81 442 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 SBSNQ6UWP8 590 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 ACP7Q6ZNF0 438 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 ZNF493Q6ZR52 646 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 SUMF2Q8NBJ7 301 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 OR4C16Q8NGL9 310 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 OR2T27Q8NH04 317 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 OSR1Q8TAX0 266 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 CCL17Q92583 94 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 MAGOHBQ96A72 148 aaKnown RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 ZNF501Q96CX3 271 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 FXYD5Q96DB9 178 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 IGF2BP2-AS1Q96M15 143 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 C17orf77Q96MU5 243 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 ZNF696Q9H7X3 374 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 ZNF586Q9NXT0 402 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 ZNF226Q9NYT6 803 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 TAS2R8Q9NYW2 309 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 NTMQ9P121 344 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 TNRC6AQ8NDV7 1962 aaKnown RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 TRAV4A0A0B4J268 109 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 A0A0B4J2A0 478 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 TRDV1A0A1B0GX56 115 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 E9PLD3 99 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 FNDC10F2Z333 226 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 H0Y9J4 135 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 NTN3O00634 580 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 ATP6V0E1O15342 81 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 EDF1O60869 148 aaKnown RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 PGLYRP1O75594 196 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 FCGR3AP08637 254 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 ZNF728P0DKX0 622 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 CXCL8P10145 99 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 HIST1H1DP16402 221 aaKnown RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 HERV-K104P61576 105 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 EIF5AP63241 154 aaKnown RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 CATR1Q13166 79 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 EIF3IQ13347 325 aaKnown RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 ZNF141Q15928 474 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 Q6ZRU5 148 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 OR2M3Q8NG83 312 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 RITA1Q96K30 269 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 PGLYRP4Q96LB8 373 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 NMNAT3Q96T66 252 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 SLC25A21Q9BQT8 299 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 MIEN1Q9BRT3 115 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 LIME1Q9H400 295 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 RERGLQ9H628 205 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 EXOSC3Q9NQT5 275 aaKnown RBP3.08□□□□□ -1.92
CLHC1-201ENST00000401408 DEPPQ9NTK1 212 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 C11orf21Q9P2W6 132 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 SHPKQ9UHJ6 478 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 V9GY05 133 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 NOTCH1P46531 2555 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 NBEAL2Q6ZNJ1 2754 aa3.08□□□□□ -1.92
CLHC1-201ENST00000401408 MYL12BO14950 172 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 CA2P00918 260 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 OR5AC1P0C628 307 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 SPINK8P0C7L1 97 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 HKR1P10072 659 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 GADD45AP24522 165 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 FKBP2P26885 142 aaKnown RBP3.07□□□□□ -1.92
CLHC1-201ENST00000401408 RBMXP38159 391 aaKnown RBP3.07□□□□□ -1.92
CLHC1-201ENST00000401408 PSMB2P49721 201 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 THBS3P49746 956 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 MFAP2P55001 183 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 FOXA1P55317 472 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 GFERP55789 205 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 RPS23P62266 143 aaKnown RBP3.07□□□□□ -1.92
CLHC1-201ENST00000401408 SRPXP78539 464 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 KDM4DQ6B0I6 523 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 EIF5AL1Q6IS14 154 aaKnown RBP3.07□□□□□ -1.92
CLHC1-201ENST00000401408 GFRALQ6UXV0 394 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 FOXL2NBQ6ZUU3 175 aa3.07□□□□□ -1.92
CLHC1-201ENST00000401408 TMUB2Q71RG4 321 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms