RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 PRB4P10163 310 aaPredicted RBP14.03□□□□□ -0.16
PTPRA-205ENST00000399903 MLANAQ16655 118 aa14.03□□□□□ -0.16
PTPRA-205ENST00000399903 GDF5OSQ5U4N7 250 aa14.03□□□□□ -0.16
PTPRA-205ENST00000399903 METRNQ9UJH8 293 aa14.03□□□□□ -0.16
PTPRA-205ENST00000399903 TCF19Q9Y242 345 aa14.03□□□□□ -0.16
PTPRA-205ENST00000399903 GFRA3O60609 400 aa14.03□□□□□ -0.16
PTPRA-205ENST00000399903 IGHV3-48P01763 117 aa14.03□□□□□ -0.16
PTPRA-205ENST00000399903 SPRR3Q9UBC9 169 aa14.03□□□□□ -0.16
PTPRA-205ENST00000399903 ADGRG4Q8IZF6 3080 aa14.03□□□□□ -0.16
PTPRA-205ENST00000399903 LEPROTL1O95214 131 aa14.02□□□□□ -0.16
PTPRA-205ENST00000399903 TCF24Q7RTU0 167 aa14.02□□□□□ -0.16
PTPRA-205ENST00000399903 LHFPL4Q7Z7J7 247 aa14.02□□□□□ -0.16
PTPRA-205ENST00000399903 ZBTB34Q8NCN2 500 aa14.02□□□□□ -0.16
PTPRA-205ENST00000399903 MBNL3Q9NUK0 354 aaKnown RBP14.02□□□□□ -0.16
PTPRA-205ENST00000399903 OOEPA6NGQ2 149 aa14.02□□□□□ -0.17
PTPRA-205ENST00000399903 C2orf70A6NJV1 201 aa14.02□□□□□ -0.17
PTPRA-205ENST00000399903 FABP6P51161 128 aa14.02□□□□□ -0.17
PTPRA-205ENST00000399903 NUP35Q8NFH5 326 aa14.02□□□□□ -0.17
PTPRA-205ENST00000399903 DUSP13Q9UII6 198 aa14.02□□□□□ -0.17
PTPRA-205ENST00000399903 HIGD1CA8MV81 97 aa14.02□□□□□ -0.17
PTPRA-205ENST00000399903 PLAUP00749 431 aa14.02□□□□□ -0.17
PTPRA-205ENST00000399903 TMEM140Q9NV12 185 aa14.02□□□□□ -0.17
PTPRA-205ENST00000399903 ZNF766Q5HY98 468 aa14.01□□□□□ -0.17
PTPRA-205ENST00000399903 PKIBQ9C010 78 aa14.01□□□□□ -0.17
PTPRA-205ENST00000399903 HILPDAQ9Y5L2 63 aa14.01□□□□□ -0.17
PTPRA-205ENST00000399903 C7orf71A4D174 169 aa14.01□□□□□ -0.17
PTPRA-205ENST00000399903 UBE2L3P68036 154 aaKnown RBP14.01□□□□□ -0.17
PTPRA-205ENST00000399903 COX19Q49B96 90 aa14.01□□□□□ -0.17
PTPRA-205ENST00000399903 C12orf54Q6X4T0 127 aa14.01□□□□□ -0.17
PTPRA-205ENST00000399903 C11orf52Q96A22 123 aa14.01□□□□□ -0.17
PTPRA-205ENST00000399903 CHODLQ9H9P2 273 aa14.01□□□□□ -0.17
PTPRA-205ENST00000399903 TPRP12270 2363 aaKnown RBP14□□□□□ -0.17
PTPRA-205ENST00000399903 ISLRO14498 428 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 Q6ZR03 302 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 TMEM116Q8NCL8 245 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 SNRNP40Q96DI7 357 aaKnown RBP14□□□□□ -0.17
PTPRA-205ENST00000399903 MDP1Q86V88 176 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 FDCSPQ8NFU4 85 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 S1PR3Q99500 378 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 HES4Q9HCC6 221 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 TMEM167BQ9NRX6 74 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 INTS1Q8N201 2190 aaKnown RBP14□□□□□ -0.17
PTPRA-205ENST00000399903 POLEQ07864 2286 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 FBLL1A6NHQ2 334 aaKnown RBP14□□□□□ -0.17
PTPRA-205ENST00000399903 LYZL6O75951 148 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 AREGP15514 252 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 TBR1Q16650 682 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 FER1L6-AS2Q96M78 137 aa14□□□□□ -0.17
PTPRA-205ENST00000399903 TET2Q6N021 2002 aaPredicted RBP13.99□□□□□ -0.17
PTPRA-205ENST00000399903 KLRC4-KLRK1H3BQV0 150 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 CD46P15529 392 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 RHOGP84095 191 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 DEFB125Q8N687 156 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 SMIM12Q96EX1 92 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 C1orf159Q96HA4 380 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 MRPL27Q9P0M9 148 aaKnown RBP13.99□□□□□ -0.17
PTPRA-205ENST00000399903 SMIM27A0A1W2PRY6 76 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 SPINT2O43291 252 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 GNG7O60262 68 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 FTH1P19P0C7X4 201 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 ARR3P36575 388 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 TMEM249Q2WGJ8 235 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 FAM214BQ7L5A3 538 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 Q8TCH9 128 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 COQ2Q96H96 371 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 TMEM191AQ9H0A3 160 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 RELNP78509 3460 aa13.99□□□□□ -0.17
PTPRA-205ENST00000399903 SYS1-DBNDD2H3BUS1 97 aa13.98□□□□□ -0.17
PTPRA-205ENST00000399903 PYYP10082 97 aa13.98□□□□□ -0.17
PTPRA-205ENST00000399903 GNG5P63218 68 aa13.98□□□□□ -0.17
PTPRA-205ENST00000399903 FOXE3Q13461 319 aa13.98□□□□□ -0.17
PTPRA-205ENST00000399903 CNEP1R1Q8N9A8 125 aa13.98□□□□□ -0.17
PTPRA-205ENST00000399903 TNRC6AQ8NDV7 1962 aaKnown RBP13.98□□□□□ -0.17
PTPRA-205ENST00000399903 TRGV5A0A0B4J1U4 118 aa13.98□□□□□ -0.17
PTPRA-205ENST00000399903 FAM231BA6NCW3 169 aa13.98□□□□□ -0.17
PTPRA-205ENST00000399903 MDS2Q8NDY4 140 aa13.98□□□□□ -0.17
PTPRA-205ENST00000399903 OR1B1Q8NGR6 318 aa13.98□□□□□ -0.17
PTPRA-205ENST00000399903 KLF13Q9Y2Y9 288 aaPredicted RBP13.98□□□□□ -0.17
PTPRA-205ENST00000399903 H3BUT2 72 aa13.98□□□□□ -0.17
PTPRA-205ENST00000399903 DUTP33316 252 aaKnown RBP13.98□□□□□ -0.17
PTPRA-205ENST00000399903 BLNKQ8WV28 456 aa13.98□□□□□ -0.17
PTPRA-205ENST00000399903 PGLYRP4Q96LB8 373 aa13.98□□□□□ -0.17
PTPRA-205ENST00000399903 PEF1Q9UBV8 284 aaKnown RBP13.98□□□□□ -0.17
PTPRA-205ENST00000399903 REG1AP05451 166 aa13.97□□□□□ -0.17
PTPRA-205ENST00000399903 VDAC2P45880 294 aaPredicted RBP13.97□□□□□ -0.17
PTPRA-205ENST00000399903 OR9G1Q8NH87 305 aa13.97□□□□□ -0.17
PTPRA-205ENST00000399903 LY96Q9Y6Y9 160 aa13.97□□□□□ -0.17
PTPRA-205ENST00000399903 H3BTX0 84 aa13.97□□□□□ -0.17
PTPRA-205ENST00000399903 IGLV2-8P01709 118 aa13.97□□□□□ -0.17
PTPRA-205ENST00000399903 RPL24P83731 157 aaKnown RBP13.97□□□□□ -0.17
PTPRA-205ENST00000399903 Q8IYB0 196 aa13.97□□□□□ -0.17
PTPRA-205ENST00000399903 OR2V2Q96R30 315 aa13.97□□□□□ -0.17
PTPRA-205ENST00000399903 ST20Q9HBF5 79 aa13.97□□□□□ -0.17
PTPRA-205ENST00000399903 AMMECR1Q9Y4X0 333 aaPredicted RBP13.97□□□□□ -0.17
PTPRA-205ENST00000399903 IGKV3D-15A0A087WSY6 115 aa13.96□□□□□ -0.17
PTPRA-205ENST00000399903 GPR183P32249 361 aa13.96□□□□□ -0.17
PTPRA-205ENST00000399903 MORN5Q5VZ52 161 aa13.96□□□□□ -0.17
PTPRA-205ENST00000399903 FER1L6-AS1Q8NA97 138 aa13.96□□□□□ -0.17
PTPRA-205ENST00000399903 OR1N2Q8NGR9 330 aa13.96□□□□□ -0.17
PTPRA-205ENST00000399903 SLC25A40Q8TBP6 338 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms