RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 TMUB1Q9BVT8 246 aa14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 TWSG1Q9GZX9 223 aa14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 TRAV9-1A0A075B6T8 112 aa14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 KIR3DS1Q14943 382 aa14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 CRIP3Q6Q6R5 217 aa14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 CELA3AP09093 270 aa14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 CACNG7P62955 275 aa14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 PEAR1Q5VY43 1037 aaPredicted RBP14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 ZNF295-AS1Q8N0V1 137 aa14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 FAM169BQ8N8A8 192 aa14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 NUP210Q8TEM1 1887 aaPredicted RBP14.09□□□□□ -0.15
TRAF3IP1-202ENST00000391993 HSPE1P61604 102 aaKnown RBP14.08□□□□□ -0.15
TRAF3IP1-202ENST00000391993 SLC25A45Q8N413 288 aa14.08□□□□□ -0.15
TRAF3IP1-202ENST00000391993 TRGV10A0A0A0MS01 117 aa14.08□□□□□ -0.16
TRAF3IP1-202ENST00000391993 A0A1B0GWB2 263 aa14.08□□□□□ -0.16
TRAF3IP1-202ENST00000391993 SCGB1C2P0DMR2 95 aa14.08□□□□□ -0.16
TRAF3IP1-202ENST00000391993 SFXN3Q9BWM7 321 aa14.08□□□□□ -0.16
TRAF3IP1-202ENST00000391993 C1QTNF5Q9BXJ0 243 aa14.08□□□□□ -0.16
TRAF3IP1-202ENST00000391993 LOXL2Q9Y4K0 774 aa14.08□□□□□ -0.16
TRAF3IP1-202ENST00000391993 SSPNQ14714 243 aa14.08□□□□□ -0.16
TRAF3IP1-202ENST00000391993 C5orf17Q8NAS9 161 aa14.08□□□□□ -0.16
TRAF3IP1-202ENST00000391993 CELA3BP08861 270 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 FAM201AQ5SY85 155 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 TMEM42Q69YG0 159 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 CHD7Q9P2D1 2997 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 PEX7O00628 323 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 TAX1BP3O14907 124 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 CD5LO43866 347 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 PTGDSP41222 190 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 IGHV3-72A0A0B4J1Y9 119 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 SMIM13P0DJ93 91 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 NXPH1P58417 271 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 FOXF2Q12947 444 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 OR10X1Q8NGY0 326 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 ZNF257Q9Y2Q1 563 aa14.07□□□□□ -0.16
TRAF3IP1-202ENST00000391993 K7EMI3 77 aa14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 SLC25A17O43808 307 aa14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 CKS1BP61024 79 aa14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 SUB1P53999 127 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 GOLT1AQ6ZVE7 132 aa14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 ZNF784Q8NCA9 323 aaPredicted RBP14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 HARBI1Q96MB7 349 aa14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 C2CD4DB7Z1M9 353 aa14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 AZU1P20160 251 aa14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 GRAMD2BQ96HH9 432 aa14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 OR10W1Q8NGF6 305 aa14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 OR4A5Q8NH83 315 aa14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 CT55Q8WUE5 264 aa14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 TSSC4Q9Y5U2 329 aaPredicted RBP14.06□□□□□ -0.16
TRAF3IP1-202ENST00000391993 VPS13AQ96RL7 3174 aa14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 TRAV8-1A0A0A6YYK1 113 aa14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 CYC1P08574 325 aa14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 PAX1P15863 534 aa14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 ZNF418Q8TF45 676 aaPredicted RBP14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 OBSL1O75147 1896 aa14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 PRDX2P32119 198 aa14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 TIMM23BQ5SRD1 257 aa14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 LINC00596Q86U02 117 aa14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 FAM222BQ8WU58 562 aa14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 ZNF497Q6ZNH5 498 aa14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 COL25A1Q9BXS0 654 aaPredicted RBP14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 THSD7BQ9C0I4 1608 aa14.05□□□□□ -0.16
TRAF3IP1-202ENST00000391993 ZNF718Q3SXZ3 478 aa14.04□□□□□ -0.16
TRAF3IP1-202ENST00000391993 SAMD5Q5TGI4 173 aa14.04□□□□□ -0.16
TRAF3IP1-202ENST00000391993 ZNF414Q96IQ9 312 aa14.04□□□□□ -0.16
TRAF3IP1-202ENST00000391993 SRSF8Q9BRL6 282 aaKnown RBP14.04□□□□□ -0.16
TRAF3IP1-202ENST00000391993 METRNQ9UJH8 293 aa14.04□□□□□ -0.16
TRAF3IP1-202ENST00000391993 LINC00310P59036 64 aa14.04□□□□□ -0.16
TRAF3IP1-202ENST00000391993 ASCL4Q6XD76 172 aa14.04□□□□□ -0.16
TRAF3IP1-202ENST00000391993 IGHV5-10-1A0A0J9YXX1 117 aa14.04□□□□□ -0.16
TRAF3IP1-202ENST00000391993 CNIH1O95406 144 aa14.04□□□□□ -0.16
TRAF3IP1-202ENST00000391993 RIGQ13278 110 aa14.04□□□□□ -0.16
TRAF3IP1-202ENST00000391993 ETDBQ3ZM63 59 aa14.04□□□□□ -0.16
TRAF3IP1-202ENST00000391993 PCNX2A6NKB5 2137 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 PSG3Q16557 428 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 TMEM164Q5U3C3 297 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 LINC00305Q7Z4B0 112 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 C5orf30Q96GV9 206 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 KLK15Q9H2R5 256 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 PRDM6Q9NQX0 595 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 ACACAQ13085 2346 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 SLC25A53Q5H9E4 307 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 MOGAT3Q86VF5 341 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 ZNF716A6NP11 495 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 C9JCJ5 164 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 BMI1P35226 326 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 DUSP23Q9BVJ7 150 aa14.03□□□□□ -0.16
TRAF3IP1-202ENST00000391993 GGTLC3B5MD39 225 aa14.02□□□□□ -0.16
TRAF3IP1-202ENST00000391993 YPEL1O60688 119 aa14.02□□□□□ -0.16
TRAF3IP1-202ENST00000391993 CLDN18P56856 261 aa14.02□□□□□ -0.16
TRAF3IP1-202ENST00000391993 CLUHP3Q96NS8 147 aa14.02□□□□□ -0.16
TRAF3IP1-202ENST00000391993 YPEL2Q96QA6 119 aa14.02□□□□□ -0.16
TRAF3IP1-202ENST00000391993 HIST1H4GQ99525 98 aa14.02□□□□□ -0.16
TRAF3IP1-202ENST00000391993 TANC2Q9HCD6 1990 aa14.02□□□□□ -0.17
TRAF3IP1-202ENST00000391993 CKS2P33552 79 aa14.02□□□□□ -0.17
TRAF3IP1-202ENST00000391993 TMEM160Q9NX00 188 aa14.02□□□□□ -0.17
TRAF3IP1-202ENST00000391993 ADAMTS9Q9P2N4 1935 aa14.02□□□□□ -0.17
TRAF3IP1-202ENST00000391993 TMEM265A0A087WTH1 108 aa14.02□□□□□ -0.17
TRAF3IP1-202ENST00000391993 SCGB1D4Q6XE38 83 aa14.02□□□□□ -0.17
TRAF3IP1-202ENST00000391993 TNRC6AQ8NDV7 1962 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms