RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 AK3Q9UIJ7 227 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 ZNF580Q9UK33 172 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 ASB4Q9Y574 426 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 COL5A1P20908 1838 aaPredicted RBP4.41□□□□□ -1.7
TRAV35-201ENST00000390462 SCN2AQ99250 2005 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 SPTAN1Q13813 2472 aaKnown RBP4.4□□□□□ -1.7
TRAV35-201ENST00000390462 A0A1W2PP18 115 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 LINC00862A6NCI5 91 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 A6NDX4 124 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 A8MUN3 132 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 CSN2P05814 226 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 RBP1P09455 135 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 GPX2P18283 190 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 PPIBP23284 216 aaKnown RBP4.4□□□□□ -1.71
TRAV35-201ENST00000390462 OPRM1P35372 400 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 G6PCP35575 357 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 CXCL12P48061 93 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 PSMD8P48556 350 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 TIFABQ6ZNK6 161 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 C18orf65Q6ZTR6 163 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 TCF24Q7RTU0 167 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 LRRC18Q8N456 261 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 C12orf45Q8N5I9 185 aaPredicted RBP4.4□□□□□ -1.71
TRAV35-201ENST00000390462 Q8N9W7 124 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 DEFB124Q8NES8 71 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 OR10G2Q8NGC3 310 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 OR13C8Q8NGS7 320 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 OR5W2Q8NH69 310 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 OR4A5Q8NH83 315 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 ZNF721Q8TF20 911 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 MALSU1Q96EH3 234 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 IGF2BP2-AS1Q96M15 143 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 HSPB9Q9BQS6 159 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 PBOV1Q9GZY1 135 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 PDFQ9HBH1 243 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 CSAG2Q9Y5P2 127 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 DOPEY1Q5JWR5 2465 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 COL12A1Q99715 3063 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 PTPRQQ9UMZ3 2332 aa4.4□□□□□ -1.71
TRAV35-201ENST00000390462 TRAV4A0A0B4J268 109 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 PDYNP01213 254 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 CSRP1P21291 193 aaKnown RBP4.39□□□□□ -1.71
TRAV35-201ENST00000390462 ATP5G3P48201 142 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 EMP1P54849 157 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 CKS1BP61024 79 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 ELF3P78545 371 aaPredicted RBP4.39□□□□□ -1.71
TRAV35-201ENST00000390462 HOXC5Q00444 222 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 BAMBIQ13145 260 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 NDUFA5Q16718 116 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 ZNF678Q5SXM1 525 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 GLT8D1Q68CQ7 371 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 ZFAND6Q6FIF0 208 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 LINC01551Q86U37 167 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 EXOC3-AS1Q8N2X6 119 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 CD177Q8N6Q3 437 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 FER1L6-AS1Q8NA97 138 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 OR9Q1Q8NGQ5 310 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 SGMS2Q8NHU3 365 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 RAB2BQ8WUD1 216 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 MBD3L1Q8WWY6 194 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 FGF13Q92913 245 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 CAPZA3Q96KX2 299 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 FOPNLQ96NB1 174 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 CCDC115Q96NT0 180 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 TSSK6Q9BXA6 273 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 PLA2G2FQ9BZM2 168 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 ZNF286AQ9HBT8 521 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 FBXL12Q9NXK8 326 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 SPANXCQ9NY87 97 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 ZNF230Q9UIE0 474 aaPredicted RBP4.39□□□□□ -1.71
TRAV35-201ENST00000390462 CYSLTR1Q9Y271 337 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 GOLGA4Q13439 2230 aaKnown RBP4.39□□□□□ -1.71
TRAV35-201ENST00000390462 ATMQ13315 3056 aa4.39□□□□□ -1.71
TRAV35-201ENST00000390462 NUP210Q8TEM1 1887 aaPredicted RBP4.39□□□□□ -1.71
TRAV35-201ENST00000390462 TRBV19A0A075B6N1 114 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 IGKV1-12A0A0C4DH73 117 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 A0A0J9YY10 115 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 SPAARA0A1B0GVQ0 90 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 A0A1B0GX78 115 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 J3QKU1 62 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 CCNKO75909 580 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 GADD45GO95257 159 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 IGKV1D-12P01611 117 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 BPGMP07738 259 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 SMIM17P0DL12 118 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 ZNF823P16415 610 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 PPP1CCP36873 323 aaKnown RBP4.38□□□□□ -1.71
TRAV35-201ENST00000390462 TAF6P49848 677 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 IGLV3-21P80748 117 aaPredicted RBP4.38□□□□□ -1.71
TRAV35-201ENST00000390462 TNFAIP8L3Q5GJ75 292 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 Q6ZS52 159 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 ZNF283Q8N7M2 679 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 Q8N9P0 234 aaPredicted RBP4.38□□□□□ -1.71
TRAV35-201ENST00000390462 OR4D11Q8NGI4 311 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 SLC25A40Q8TBP6 338 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 CIRBP-AS1Q8TBR5 109 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 MRPL30Q8TCC3 161 aaKnown RBP4.38□□□□□ -1.71
TRAV35-201ENST00000390462 CMBLQ96DG6 245 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 PHYHIPLQ96FC7 376 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 NARS2Q96I59 477 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms