RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 HIST1H2BMQ99879 126 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 PCNX3Q9H6A9 2034 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 CACNA1GO43497 2377 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 LOC105371242A0A075B767 164 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 PSMB11A5LHX3 300 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 CACNG8Q8WXS5 425 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 ATXN7O15265 892 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 FGF16O43320 207 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 CLPSP04118 112 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 IGFBP3P17936 291 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 RNF115Q9Y4L5 304 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 C9JCJ5 164 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 C18orf12Q96KH6 178 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 RIF1Q5UIP0 2472 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 IGHV1-69-2A0A0G2JMI3 117 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 PGPEP1LA6NFU8 196 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 CCL20P78556 96 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 LY6G6FQ5SQ64 297 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 NUP210Q8TEM1 1887 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 FBLN7Q53RD9 439 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 FER1L6-AS1Q8NA97 138 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 NUP37Q8NFH4 326 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 OR4X2Q8NGF9 303 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 MBD3L1Q8WWY6 194 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 TNFRSF18Q9Y5U5 241 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 TRAV9-2A0A087WT02 112 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 RNASEH2CQ8TDP1 164 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 C2orf88Q9BSF0 95 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 EML5Q05BV3 1969 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 MEGF9Q9H1U4 602 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 TM4SF5O14894 197 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 BEND2Q8NDZ0 799 aa10.29□□□□□ -0.76
NPLOC4-202ENST00000374747 H3BRM9 83 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 MST1P26927 711 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 GLRXP35754 106 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 ZNF257Q9Y2Q1 563 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 IGHV3OR16-13A0A075B7E8 117 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 IGHV3-74A0A0B4J1X5 117 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 LINC00614P0C842 121 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 C1QTNF9P0C862 333 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 TMEM101Q96IK0 257 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 C1QTNF5Q9BXJ0 243 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 Q9H3A6 140 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 MUC21A0A0G2JKD1 596 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 MUC21A0A140T8X8 626 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 MUC21Q5SSG8 566 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 RNASE7Q9H1E1 156 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 FOXA2Q9Y261 457 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 PCDH15Q96QU1 1955 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 NDUFA3O95167 84 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 OR13A1Q8NGR1 328 aa10.28□□□□□ -0.76
NPLOC4-202ENST00000374747 TGFAP01135 160 aa10.27□□□□□ -0.76
NPLOC4-202ENST00000374747 HEPN1Q6WQI6 88 aa10.27□□□□□ -0.76
NPLOC4-202ENST00000374747 OR5A1Q8NGJ0 315 aa10.27□□□□□ -0.76
NPLOC4-202ENST00000374747 TRAV8-2A0A0B4J237 113 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 NHP2Q9NX24 153 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 RALGAPA1Q6GYQ0 2036 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 PI4KAP42356 2102 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 DMDP11532 3685 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 IGKV3-20P01619 116 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 LY6EQ16553 131 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 TMEM144Q7Z5S9 345 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 OSTCQ9NRP0 149 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 FBLN5Q9UBX5 448 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 SPTBN2O15020 2390 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 LEPP41159 167 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 ZNF124Q15973 351 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 Q5PR19 223 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 TEX29Q8N6K0 151 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 FBXL15Q9H469 300 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 KIAA1549LQ6ZVL6 1849 aa10.27□□□□□ -0.77
NPLOC4-202ENST00000374747 OR10J3Q5JRS4 329 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 ZNF837Q96EG3 531 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 HIST1H2BLQ99880 126 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 PIMREGQ9BSJ6 248 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 FNDC4Q9H6D8 234 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 PINLYPA6NC86 204 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 H0YIZ8 118 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 CECR9P0C854 216 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 OTORQ9NRC9 128 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 C21orf62Q9NYP8 219 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 TRBV6-7A0A0A0MS04 114 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 KBTBD11-OT1A0A1B0GTJ5 212 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 TMEM95Q3KNT9 176 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 C9orf106Q8NAJ2 232 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 FANCMQ8IYD8 2048 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 J3QRE1 110 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 IGHV1-2P23083 117 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 GATA2P23769 480 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 B9A039 149 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 TRGV3P03979 118 aa10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 SSBP4Q9BWG4 385 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-202ENST00000374747 MPZP25189 248 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 MYO7BQ6PIF6 2116 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 REPIN1Q9BWE0 567 aaKnown RBP10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 GNB1LQ9BYB4 327 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 FBXL7Q9UJT9 491 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 TTC28Q96AY4 2481 aa10.25□□□□□ -0.77
NPLOC4-202ENST00000374747 EFNA2O43921 213 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms