RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 IGHV2-70P01814 119 aa14.4□□□□□ -0.1
PTPRU-202ENST00000373779 NTF4P34130 210 aa14.4□□□□□ -0.1
PTPRU-202ENST00000373779 ZNF257Q9Y2Q1 563 aa14.4□□□□□ -0.1
PTPRU-202ENST00000373779 C17orf100A8MU93 164 aa14.4□□□□□ -0.1
PTPRU-202ENST00000373779 UNQ5815/PRO19632Q6UWF5 114 aa14.4□□□□□ -0.1
PTPRU-202ENST00000373779 C2orf88Q9BSF0 95 aa14.4□□□□□ -0.1
PTPRU-202ENST00000373779 PEF1Q9UBV8 284 aaKnown RBP14.4□□□□□ -0.1
PTPRU-202ENST00000373779 FBLL1A6NHQ2 334 aaKnown RBP14.4□□□□□ -0.1
PTPRU-202ENST00000373779 F11RQ9Y624 299 aaKnown RBP14.4□□□□□ -0.1
PTPRU-202ENST00000373779 TRAV9-2A0A087WT02 112 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 B9A039 149 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 LINC00205P59089 165 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 C16orf92Q96LL3 132 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 PRELID3AQ96N28 172 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 CACNA1EQ15878 2313 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 BSPH1Q075Z2 132 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 TRIOBPQ9H2D6 2365 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 CGB1A6NKQ9 187 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 PFN1P07737 140 aaKnown RBP14.39□□□□□ -0.11
PTPRU-202ENST00000373779 CX3CL1P78423 397 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 C2orf83Q53S99 150 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 OR10W1Q8NGF6 305 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 OTORQ9NRC9 128 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 MBNL3Q9NUK0 354 aaKnown RBP14.39□□□□□ -0.11
PTPRU-202ENST00000373779 LY96Q9Y6Y9 160 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 ZNF726P1Q15940 193 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 ZNF414Q96IQ9 312 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 TRAV5A0A0B4J249 113 aa14.39□□□□□ -0.11
PTPRU-202ENST00000373779 ZDBF2Q9HCK1 2354 aa14.38□□□□□ -0.11
PTPRU-202ENST00000373779 A0A1B0GW15 77 aa14.38□□□□□ -0.11
PTPRU-202ENST00000373779 GFRA3O60609 400 aa14.38□□□□□ -0.11
PTPRU-202ENST00000373779 LYPD6Q86Y78 171 aa14.38□□□□□ -0.11
PTPRU-202ENST00000373779 LRRK1Q38SD2 2015 aa14.38□□□□□ -0.11
PTPRU-202ENST00000373779 A1L4Q6 167 aa14.38□□□□□ -0.11
PTPRU-202ENST00000373779 PLP1P60201 277 aa14.38□□□□□ -0.11
PTPRU-202ENST00000373779 KLF2Q9Y5W3 355 aaPredicted RBP14.38□□□□□ -0.11
PTPRU-202ENST00000373779 SELLP14151 372 aa14.38□□□□□ -0.11
PTPRU-202ENST00000373779 PSMB2P49721 201 aa14.38□□□□□ -0.11
PTPRU-202ENST00000373779 TSKUQ8WUA8 353 aa14.38□□□□□ -0.11
PTPRU-202ENST00000373779 AREGP15514 252 aa14.38□□□□□ -0.11
PTPRU-202ENST00000373779 A6NNC1 897 aa14.37□□□□□ -0.11
PTPRU-202ENST00000373779 RPL13AP40429 203 aaKnown RBP14.37□□□□□ -0.11
PTPRU-202ENST00000373779 Q6AWC8 147 aa14.37□□□□□ -0.11
PTPRU-202ENST00000373779 APOBEC3AP31941 199 aaPredicted RBP14.37□□□□□ -0.11
PTPRU-202ENST00000373779 LPAR2Q9HBW0 351 aa14.37□□□□□ -0.11
PTPRU-202ENST00000373779 RPUSD1Q9UJJ7 312 aaKnown RBP14.37□□□□□ -0.11
PTPRU-202ENST00000373779 C7orf71A4D174 169 aa14.37□□□□□ -0.11
PTPRU-202ENST00000373779 ST6GALNAC3Q8NDV1 305 aa14.37□□□□□ -0.11
PTPRU-202ENST00000373779 MLNRO43193 412 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 MDS2Q8NDY4 140 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 OR10J6PQ8NGY7 276 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 LOC105371242A0A075B767 164 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 IGKV1-39P01597 117 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 IGKV1D-39P04432 117 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 CIARTQ8N365 385 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-202ENST00000373779 FAM57AQ8TBR7 257 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 NUDT10Q8NFP7 164 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 NUDT11Q96G61 164 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 DCAF16Q9NXF7 216 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 S4R3C0 116 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 RAB9AP51151 201 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 SNAI2O43623 268 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 IGHV1-46P01743 117 aa14.36□□□□□ -0.11
PTPRU-202ENST00000373779 TFPI2P48307 235 aa14.35□□□□□ -0.11
PTPRU-202ENST00000373779 LOXL3P58215 753 aa14.35□□□□□ -0.11
PTPRU-202ENST00000373779 ATP5L2Q7Z4Y8 100 aa14.35□□□□□ -0.11
PTPRU-202ENST00000373779 PLSCR4Q9NRQ2 329 aa14.35□□□□□ -0.11
PTPRU-202ENST00000373779 ZNF502Q8TBZ5 544 aa14.35□□□□□ -0.11
PTPRU-202ENST00000373779 NIT1Q86X76 327 aa14.34□□□□□ -0.11
PTPRU-202ENST00000373779 A8MWP6 167 aa14.34□□□□□ -0.11
PTPRU-202ENST00000373779 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.34□□□□□ -0.11
PTPRU-202ENST00000373779 LINC00614P0C842 121 aa14.34□□□□□ -0.11
PTPRU-202ENST00000373779 HIST1H4GQ99525 98 aa14.34□□□□□ -0.11
PTPRU-202ENST00000373779 DPM3Q9P2X0 92 aa14.34□□□□□ -0.11
PTPRU-202ENST00000373779 IGHV3-35A0A0C4DH35 117 aa14.34□□□□□ -0.11
PTPRU-202ENST00000373779 LY6G6EA0A0G2JKS1 128 aa14.34□□□□□ -0.11
PTPRU-202ENST00000373779 TMEM238LA0A1B0GVL6 79 aa14.34□□□□□ -0.11
PTPRU-202ENST00000373779 A6NJY4 79 aa14.34□□□□□ -0.11
PTPRU-202ENST00000373779 U3KQA8 63 aa14.34□□□□□ -0.11
PTPRU-202ENST00000373779 SSC4DQ8WTU2 575 aa14.33□□□□□ -0.11
PTPRU-202ENST00000373779 ALPK3Q96L96 1907 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 ID1P41134 155 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 MYOD1P15172 320 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 DLX1P56177 255 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 TRBV20OR9-2A0A075B6H5 130 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 IGKV1D-17A0A075B6S4 117 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 IGKV1D-33P01593 117 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 IGKV1-33P01594 117 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 WFDC3Q8IUB2 231 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 C18orf15Q96N68 181 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 MUC21A0A0G2JKD1 596 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 MUC21A0A140T8X8 626 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 IGHV3-23P01764 117 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 CD59P13987 128 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 MUC21Q5SSG8 566 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 RASL11AQ6T310 242 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 ORMDL3Q8N138 153 aa14.33□□□□□ -0.12
PTPRU-202ENST00000373779 CHCHD1Q96BP2 118 aaKnown RBP14.33□□□□□ -0.12
PTPRU-202ENST00000373779 ALKBH7Q9BT30 221 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-202ENST00000373779 TMEM133Q9H2Q1 129 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms