RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 IFNA17P01571 189 aa13.32□□□□□ -0.28
TRAPPC3-202ENST00000373162 S100A5P33763 92 aa13.32□□□□□ -0.28
TRAPPC3-202ENST00000373162 SPCS3P61009 180 aa13.32□□□□□ -0.28
TRAPPC3-202ENST00000373162 SUPT4H1P63272 117 aaKnown RBP13.32□□□□□ -0.28
TRAPPC3-202ENST00000373162 DHODHQ02127 395 aa13.32□□□□□ -0.28
TRAPPC3-202ENST00000373162 TMEM187Q14656 261 aa13.32□□□□□ -0.28
TRAPPC3-202ENST00000373162 WFDC3Q8IUB2 231 aa13.32□□□□□ -0.28
TRAPPC3-202ENST00000373162 TMEM170AQ8WVE7 144 aa13.32□□□□□ -0.28
TRAPPC3-202ENST00000373162 GPR146Q96CH1 333 aa13.32□□□□□ -0.28
TRAPPC3-202ENST00000373162 RRNAD1Q96FB5 475 aaKnown RBP13.32□□□□□ -0.28
TRAPPC3-202ENST00000373162 V9GYH0 126 aa13.32□□□□□ -0.28
TRAPPC3-202ENST00000373162 A0A1B0GU03 582 aa13.31□□□□□ -0.28
TRAPPC3-202ENST00000373162 CORTO00230 105 aa13.31□□□□□ -0.28
TRAPPC3-202ENST00000373162 GNG7O60262 68 aa13.31□□□□□ -0.28
TRAPPC3-202ENST00000373162 MLANAQ16655 118 aa13.31□□□□□ -0.28
TRAPPC3-202ENST00000373162 LAMTOR1Q6IAA8 161 aa13.31□□□□□ -0.28
TRAPPC3-202ENST00000373162 TMEM116Q8NCL8 245 aa13.31□□□□□ -0.28
TRAPPC3-202ENST00000373162 IL22RA2Q969J5 263 aa13.31□□□□□ -0.28
TRAPPC3-202ENST00000373162 UBQLN2Q9UHD9 624 aa13.31□□□□□ -0.28
TRAPPC3-202ENST00000373162 PLECQ15149 4684 aaKnown RBP13.31□□□□□ -0.28
TRAPPC3-202ENST00000373162 OR4C46A6NHA9 309 aa13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 IGKV1-17P01599 117 aa13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 APOHP02749 345 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 SNCAP37840 140 aa13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 NPBWR1P48145 328 aa13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 HOXA1P49639 335 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 KLF9Q13886 244 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 ZNF79Q15937 498 aa13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 ZNF600Q6ZNG1 722 aa13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 LILRB2Q8N423 598 aa13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 DUSP18Q8NEJ0 188 aa13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 OR4X1Q8NH49 305 aa13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 CACNG5Q9UF02 275 aa13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 TP53TG1Q9Y2A0 90 aa13.3□□□□□ -0.28
TRAPPC3-202ENST00000373162 TRAV14DV4A0A0A6YYC5 116 aa13.29□□□□□ -0.28
TRAPPC3-202ENST00000373162 CLN5O75503 358 aa13.29□□□□□ -0.28
TRAPPC3-202ENST00000373162 NMSQ5H8A3 153 aa13.29□□□□□ -0.28
TRAPPC3-202ENST00000373162 TMEM268Q5VZI3 342 aa13.29□□□□□ -0.28
TRAPPC3-202ENST00000373162 PDCD10Q9BUL8 212 aa13.29□□□□□ -0.28
TRAPPC3-202ENST00000373162 PUS1Q9Y606 427 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAPPC3-202ENST00000373162 IGHV3-49A0A0A0MS15 119 aa13.28□□□□□ -0.28
TRAPPC3-202ENST00000373162 KIR2DL5BA0A0G2JN68 375 aa13.28□□□□□ -0.28
TRAPPC3-202ENST00000373162 KIR2DL5BA0A0G2JPC4 375 aa13.28□□□□□ -0.28
TRAPPC3-202ENST00000373162 FABP12A6NFH5 140 aa13.28□□□□□ -0.28
TRAPPC3-202ENST00000373162 C2orf83Q53S99 150 aa13.28□□□□□ -0.28
TRAPPC3-202ENST00000373162 Q6ZWC4 215 aa13.28□□□□□ -0.28
TRAPPC3-202ENST00000373162 KIR2DL5AQ8N109 375 aa13.28□□□□□ -0.28
TRAPPC3-202ENST00000373162 KIR2DL5BQ8NHK3 375 aa13.28□□□□□ -0.28
TRAPPC3-202ENST00000373162 ST8SIA2Q92186 375 aa13.28□□□□□ -0.28
TRAPPC3-202ENST00000373162 PRR13Q9NZ81 148 aa13.28□□□□□ -0.28
TRAPPC3-202ENST00000373162 YIF1AO95070 293 aa13.27□□□□□ -0.29
TRAPPC3-202ENST00000373162 HTR2BP41595 481 aa13.27□□□□□ -0.29
TRAPPC3-202ENST00000373162 SUB1P53999 127 aaKnown RBP eCLIP13.27□□□□□ -0.295e-9■□□□□ 9.5
TRAPPC3-202ENST00000373162 CCDC190Q86UF4 302 aa13.27□□□□□ -0.29
TRAPPC3-202ENST00000373162 GINS3Q9BRX5 216 aa13.27□□□□□ -0.29
TRAPPC3-202ENST00000373162 MAP6D1Q9H9H5 199 aa13.27□□□□□ -0.29
TRAPPC3-202ENST00000373162 PTTG2Q9NZH5 202 aa13.27□□□□□ -0.29
TRAPPC3-202ENST00000373162 SCP2D1Q9UJQ7 156 aa13.27□□□□□ -0.29
TRAPPC3-202ENST00000373162 IGHV3OR16-13A0A075B7E8 117 aa13.26□□□□□ -0.29
TRAPPC3-202ENST00000373162 IGHV3-74A0A0B4J1X5 117 aa13.26□□□□□ -0.29
TRAPPC3-202ENST00000373162 IGLC1P0CG04 106 aa13.26□□□□□ -0.29
TRAPPC3-202ENST00000373162 ZNF124Q15973 351 aa13.26□□□□□ -0.29
TRAPPC3-202ENST00000373162 PRSS54Q6PEW0 395 aa13.26□□□□□ -0.29
TRAPPC3-202ENST00000373162 RNASE11Q8TAA1 199 aaKnown RBP13.26□□□□□ -0.29
TRAPPC3-202ENST00000373162 U3KQE9 123 aa13.26□□□□□ -0.29
TRAPPC3-202ENST00000373162 TRAV2A0A0B4J234 112 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 A0A0B4J2A0 478 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 UBE2CO00762 179 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 NXPH3O95157 252 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 CRYBB3P26998 211 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 OPRK1P41145 380 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 APOC4P55056 127 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 EWSR1Q01844 656 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 SPANXN2Q5MJ10 180 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 TCF24Q7RTU0 167 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 SLC24A4Q8NFF2 622 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 RNASEH2CQ8TDP1 164 aaKnown RBP13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 ENY2Q9NPA8 101 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 HSPB7Q9UBY9 170 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 SHPKQ9UHJ6 478 aa13.25□□□□□ -0.29
TRAPPC3-202ENST00000373162 CD5P06127 495 aa13.24□□□□□ -0.29
TRAPPC3-202ENST00000373162 SULT1A3P0DMM9 295 aa13.24□□□□□ -0.29
TRAPPC3-202ENST00000373162 SULT1A4P0DMN0 295 aa13.24□□□□□ -0.29
TRAPPC3-202ENST00000373162 TNFRSF9Q07011 255 aa13.24□□□□□ -0.29
TRAPPC3-202ENST00000373162 LYZL2Q7Z4W2 148 aa13.24□□□□□ -0.29
TRAPPC3-202ENST00000373162 APRG1Q8IVJ8 170 aa13.24□□□□□ -0.29
TRAPPC3-202ENST00000373162 FAM24BQ8N5W8 94 aa13.24□□□□□ -0.29
TRAPPC3-202ENST00000373162 IL17DQ8TAD2 202 aa13.24□□□□□ -0.29
TRAPPC3-202ENST00000373162 RNF183Q96D59 192 aa13.24□□□□□ -0.29
TRAPPC3-202ENST00000373162 SCGB3A2Q96PL1 93 aa13.24□□□□□ -0.29
TRAPPC3-202ENST00000373162 HYDINQ4G0P3 5121 aa13.23□□□□□ -0.29
TRAPPC3-202ENST00000373162 PITX3O75364 302 aa13.23□□□□□ -0.29
TRAPPC3-202ENST00000373162 DFFBO76075 338 aa13.23□□□□□ -0.29
TRAPPC3-202ENST00000373162 DEFB135Q30KP9 77 aa13.23□□□□□ -0.29
TRAPPC3-202ENST00000373162 TIGITQ495A1 244 aa13.23□□□□□ -0.29
TRAPPC3-202ENST00000373162 DEDD2Q8WXF8 326 aa13.23□□□□□ -0.29
TRAPPC3-202ENST00000373162 MS4A6AQ9H2W1 248 aa13.23□□□□□ -0.29
TRAPPC3-202ENST00000373162 HEYLQ9NQ87 328 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC3-202ENST00000373162 KCNIP3Q9Y2W7 256 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms