RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ZAR1Q86SH2 424 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 DUX3Q96PT4 197 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 IFITM1P13164 125 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 ANXA2RQ3ZCQ2 193 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 TTC9CQ8N5M4 171 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 ZNF714Q96N38 554 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 TRBV20OR9-2A0A075B6H5 130 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 ZIC3O60481 467 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 CD1AP06126 327 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 RPL8P62917 257 aaKnown RBP9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 TMEM240Q5SV17 173 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 VSIRQ9H7M9 311 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 NKX2-8O15522 239 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 CYTL1Q9NRR1 136 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 GZMHP20718 246 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 ZNF658BQ4V348 819 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 CT62P0C5K7 136 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 C3orf79P0CE67 100 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 GNG5P63218 68 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 CD300EQ496F6 205 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 ZNF562Q6V9R5 426 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 A0A1W2PRE2 83 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 IGHV3-23P01764 117 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 FAM159AQ6UWV7 190 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 TNRC6BQ9UPQ9 1833 aaKnown RBP9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 TRAV26-1A0A087WT03 109 aa9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 YBX2Q9Y2T7 364 aaKnown RBP9.41□□□□□ -0.9
CDC42BPA-205ENST00000366769 NPIPB3Q92617 1050 aa9.4□□□□□ -0.9
CDC42BPA-205ENST00000366769 ZNF488Q96MN9 340 aa9.4□□□□□ -0.9
CDC42BPA-205ENST00000366769 FOXL1Q12952 345 aa9.4□□□□□ -0.9
CDC42BPA-205ENST00000366769 VGLL1Q99990 258 aa9.4□□□□□ -0.9
CDC42BPA-205ENST00000366769 SCTP09683 121 aa9.4□□□□□ -0.9
CDC42BPA-205ENST00000366769 LIMS2Q7Z4I7 341 aa9.4□□□□□ -0.9
CDC42BPA-205ENST00000366769 H3BRM9 83 aa9.4□□□□□ -0.9
CDC42BPA-205ENST00000366769 GOLT1AQ6ZVE7 132 aa9.4□□□□□ -0.9
CDC42BPA-205ENST00000366769 C17orf51A8MQB3 221 aa9.4□□□□□ -0.91
CDC42BPA-205ENST00000366769 SRD5A2P31213 254 aa9.4□□□□□ -0.91
CDC42BPA-205ENST00000366769 LHX8Q68G74 356 aa9.4□□□□□ -0.91
CDC42BPA-205ENST00000366769 OR2H1Q9GZK4 316 aa9.4□□□□□ -0.91
CDC42BPA-205ENST00000366769 RBMY1BA6NDE4 496 aaKnown RBP9.4□□□□□ -0.91
CDC42BPA-205ENST00000366769 RBMY1EA6NEQ0 496 aaKnown RBP9.4□□□□□ -0.91
CDC42BPA-205ENST00000366769 IGLV3-25P01717 112 aa9.4□□□□□ -0.91
CDC42BPA-205ENST00000366769 RBMY1DP0C7P1 496 aaKnown RBP9.4□□□□□ -0.91
CDC42BPA-205ENST00000366769 RBMY1A1P0DJD3 496 aaKnown RBP9.4□□□□□ -0.91
CDC42BPA-205ENST00000366769 RBMY1CP0DJD4 496 aa9.4□□□□□ -0.91
CDC42BPA-205ENST00000366769 LEAP2Q969E1 77 aa9.4□□□□□ -0.91
CDC42BPA-205ENST00000366769 PPIFP30405 207 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 RNASE4P34096 147 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 F8P00451 2351 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 UCN2Q96RP3 112 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 LINC01587Q99440 93 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 C1orf43Q9BWL3 253 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 SETD2Q9BYW2 2564 aaPredicted RBP9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 TMEM229AB2RXF0 380 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 HMGA1P17096 107 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 FXYD7P58549 80 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 NFAM1Q8NET5 270 aaPredicted RBP9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 VKORC1Q9BQB6 163 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 ZNF688P0C7X2 276 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 RPS20P60866 119 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 UBE2DNLQ8IWF7 75 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 BCL6BQ8N143 479 aaPredicted RBP9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 NEUROG1Q92886 237 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 C9orf118A6NHY6 69 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 MST1LQ2TV78 715 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 SAP30O75446 220 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 CGAP01215 116 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 PAPPA-AS1Q5QFB9 102 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 CBLN3Q6UW01 205 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 AICDAQ9GZX7 198 aa9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 WISP3O95389 354 aaPredicted RBP9.39□□□□□ -0.91
CDC42BPA-205ENST00000366769 A0A1B0GW64 132 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 DLL1O00548 723 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 SCGB3A1Q96QR1 104 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 TXNDC17Q9BRA2 123 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 ZXDCQ2QGD7 858 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 SAXO1Q8IYX7 474 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 S4R3C0 116 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 RND2P52198 227 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 C1orf210Q8IVY1 113 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 ZC2HC1AQ96GY0 325 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 A0A0U1RRA0 63 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 CRYBA4P53673 196 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 HIVEP3Q5T1R4 2406 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 CELA2BP08218 269 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 TM4SF4P48230 202 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 UNC119Q13432 240 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 SSC4DQ8WTU2 575 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 CCL19Q99731 98 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 RPL36A-HNRNPH2H7BZ11 118 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 LHX2P50458 406 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 ZNF415Q09FC8 603 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 REPIN1Q9BWE0 567 aaKnown RBP9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 CACNA1AO00555 2505 aa9.38□□□□□ -0.91
CDC42BPA-205ENST00000366769 SPAARA0A1B0GVQ0 90 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 LILRA1O75019 489 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 ETDBQ3ZM63 59 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 TRBV24-1A0A075B6N3 115 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 J3QT63 122 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 FBXW9Q5XUX1 488 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms