RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ZFP2Q6ZN57 461 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 SLC25A26Q70HW3 274 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 SSX6Q7RTT6 188 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 HS3ST5Q8IZT8 346 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 CBR4Q8N4T8 237 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 MYOZ3Q8TDC0 251 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 ITFG2Q969R8 447 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 HSPB9Q9BQS6 159 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 TM2D3Q9BRN9 247 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 YIPF3Q9GZM5 350 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 LINC00574Q9H8X3 128 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 MTFP1Q9UDX5 166 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 SLC7A11Q9UPY5 501 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 PSG11Q9UQ72 335 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 HSPE1-MOB4S4R3N1 261 aa3.49□□□□□ -1.85
RNU4-39P-201ENST00000362455 VPS13DQ5THJ4 4388 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 IGHV3-72A0A0B4J1Y9 119 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 A6NDN8 102 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 OOSP1A8MZH6 123 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 H7C1H1 209 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 I3L521 148 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 M0R129 80 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 FGF16O43320 207 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 SNAI2O43623 268 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 OR2H2O95918 312 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 SPNP16150 400 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 RAB3AP20336 220 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 PSMB8P28062 276 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 MNAT1P51948 309 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 CDK5R1Q15078 307 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 OR2T5Q6IEZ7 315 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 ZNF322Q6U7Q0 402 aaPredicted RBP3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 SLC35E3Q7Z769 313 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 FAM58AQ8N1B3 248 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 TMEM104Q8NE00 496 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 OR11H1Q8NG94 326 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 OR10G2Q8NGC3 310 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 OR2T29Q8NH02 315 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 ADAT3Q96EY9 351 aaPredicted RBP3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 NRBF2Q96F24 287 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 SDHCQ99643 169 aaPredicted RBP3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 BCL7BQ9BQE9 202 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 ABCG5Q9H222 651 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 HMG20AQ9NP66 347 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 ZMAT5Q9UDW3 170 aaKnown RBP3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 OR52A1Q9UKL2 312 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 KLK12Q9UKR0 248 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 RAB26Q9ULW5 256 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 SAMHD1Q9Y3Z3 626 aaKnown RBP3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 R4GMQ9 66 aa3.48□□□□□ -1.85
RNU4-39P-201ENST00000362455 ABCA13Q86UQ4 5058 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 TRGV10A0A0A0MS01 117 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 ODAMA1E959 279 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 H3BN98 237 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 GABRPO00591 440 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 CCDC22O60826 627 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 E2F6O75461 281 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 HPRT1P00492 218 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 OXTP01178 125 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 IGKV1D-33P01593 117 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 IGKV1-33P01594 117 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 PRKACAP17612 351 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 AZU1P20160 251 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 NFYBP25208 207 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 KIR3DL2P43630 455 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 REG1BP48304 166 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 RAB7AP51149 207 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 KRTAP12-2P59991 146 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 HES1Q14469 280 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 ZNF266Q14584 549 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 RPEL1Q2QD12 228 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 ORMDL2Q53FV1 153 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 AADACL4Q5VUY2 407 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 Q6ZVH6 145 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 TRAPPC6BQ86SZ2 158 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 PGAM4Q8N0Y7 254 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 CYB561D1Q8N8Q1 229 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 C11orf72Q8NBR9 251 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 INO80EQ8NBZ0 244 aaPredicted RBP3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 OR6Q1Q8NGQ2 317 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 OR8U1Q8NH10 309 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 TEX47Q8TBZ9 253 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 C4orf3Q8WVX3 66 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 RPEQ96AT9 228 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 CMTM5Q96DZ9 223 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 SPACA5Q96QH8 159 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 NABP2Q9BQ15 211 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 MROQ9BYG7 248 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 CHST5Q9GZS9 411 aa3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 ALX4Q9H161 411 aaPredicted RBP3.47□□□□□ -1.85
RNU4-39P-201ENST00000362455 IGHV1-3A0A0C4DH29 117 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 ZNF729A6NN14 1252 aaPredicted RBP3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 G3V318 75 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 C15orf65H3BRN8 121 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 TOR1AO14656 332 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 RPP14O95059 124 aaKnown RBP3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 HMGN1P05114 100 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 CSN2P05814 226 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 SSTR5P35346 364 aa3.46□□□□□ -1.86
RNU4-39P-201ENST00000362455 BCAP31P51572 246 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms