RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 MMDQ15546 238 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 MMD2Q8IY49 270 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 ZNF714Q96N38 554 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 PSMG3Q9BT73 122 aaPredicted RBP6.79□□□□□ -1.32
HPS4-201ENST00000336873 SNAI2O43623 268 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 CRYABP02511 175 aaKnown RBP6.78□□□□□ -1.32
HPS4-201ENST00000336873 CEACAM1P13688 526 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 USF1P22415 310 aaPredicted RBP6.78□□□□□ -1.32
HPS4-201ENST00000336873 TFPI2P48307 235 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 DAZAP2Q15038 168 aaPredicted RBP6.78□□□□□ -1.32
HPS4-201ENST00000336873 EFNB3Q15768 340 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 MSMPQ1L6U9 139 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 RPEL1Q2QD12 228 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 HLA-DRB5Q30154 266 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 KLF17Q5JT82 389 aaPredicted RBP6.78□□□□□ -1.32
HPS4-201ENST00000336873 IBA57Q5T440 356 aaKnown RBP6.78□□□□□ -1.32
HPS4-201ENST00000336873 C22orf34Q6ZV56 151 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 ZBTB34Q8NCN2 500 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 SLC45A2Q9UMX9 530 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 LRBAP50851 2863 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 NRN1LQ496H8 165 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 TMEM14EPQ6UXP3 125 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 MGST2Q99735 147 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 FBXL15Q9H469 300 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 RAB9BQ9NP90 201 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 ZNF586Q9NXT0 402 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 EPG5Q9HCE0 2579 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 TNRC6AQ8NDV7 1962 aaKnown RBP6.78□□□□□ -1.32
HPS4-201ENST00000336873 CHEK1O14757 476 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 RBFOX2O43251 390 aaKnown RBP eCLIP6.78□□□□□ -1.32
HPS4-201ENST00000336873 PDE6DO43924 150 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 IGLV2-14P01704 120 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 LINC00614P0C842 121 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 ADMP35318 185 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 GLRXP35754 106 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 SUB1P53999 127 aaKnown RBP eCLIP6.78□□□□□ -1.32
HPS4-201ENST00000336873 PMCHL1Q16048 86 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 LYPD2Q6UXB3 125 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 PRR7Q8TB68 274 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 GGTLC1Q9BX51 225 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 GAL3ST2Q9H3Q3 398 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 CLEC5AQ9NY25 188 aa6.78□□□□□ -1.32
HPS4-201ENST00000336873 JMJD1CQ15652 2540 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 COL5A1P20908 1838 aaPredicted RBP6.77□□□□□ -1.33
HPS4-201ENST00000336873 LOC389332A0A1B0GUA5 103 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 BMI1P35226 326 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 C10orf113Q5VZT2 155 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 LINC01551Q86U37 167 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 ANAPC16Q96DE5 110 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 C5orf30Q96GV9 206 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 MRPS18CQ9Y3D5 142 aaKnown RBP6.77□□□□□ -1.33
HPS4-201ENST00000336873 YTHDF2Q9Y5A9 579 aaKnown RBP6.77□□□□□ -1.33
HPS4-201ENST00000336873 IGHV3-66A0A0C4DH42 116 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 KBTBD11-OT1A0A1B0GTJ5 212 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 M0QZ24 198 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 SERF1AO75920 110 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 IGHV1-46P01743 117 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 TPPP2P59282 170 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 COL5A1-AS1Q5SY13 56 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 PRNTQ86SH4 94 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 P2RX4Q99571 388 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 PAXXQ9BUH6 204 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 ZNF430Q9H8G1 570 aaPredicted RBP6.77□□□□□ -1.33
HPS4-201ENST00000336873 TRAV8-1A0A0A6YYK1 113 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 SS18L1O75177 396 aaPredicted RBP6.77□□□□□ -1.33
HPS4-201ENST00000336873 VMA21Q3ZAQ7 101 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 TMEM183AQ8IXX5 376 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 NUDT10Q8NFP7 164 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 OR1L8Q8NGR8 309 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 NGBQ9NPG2 151 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 IDI2-AS1Q9NZ38 188 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 IL19Q9UHD0 177 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 JPT1Q9UK76 154 aa6.77□□□□□ -1.33
HPS4-201ENST00000336873 SRRM5B3KS81 715 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 FAM90A26D6RGX4 464 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 TMEM250H0YL14 139 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 GFRA3O60609 400 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 GZMBP10144 247 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 PLA2G2CQ5R387 149 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 PDPNQ86YL7 162 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 C11orf53Q8IXP5 236 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 DEFB104AQ8WTQ1 72 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 PGLYRP4Q96LB8 373 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 YPEL4Q96NS1 127 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 KCNIP2Q9NS61 270 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 MBNL3Q9NUK0 354 aaKnown RBP6.76□□□□□ -1.33
HPS4-201ENST00000336873 AMMECR1Q9Y4X0 333 aaPredicted RBP6.76□□□□□ -1.33
HPS4-201ENST00000336873 CT45A6P0DMU7 189 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 CT45A5P0DMU8 189 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 CT45A7P0DMV0 189 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 COL8A1P27658 744 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 LINC00305Q7Z4B0 112 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 MBD3L1Q8WWY6 194 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 AP1S3Q96PC3 154 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 AGMATQ9BSE5 352 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 PRNDQ9UKY0 176 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 WDR83OSQ9Y284 106 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 CUBNO60494 3623 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 ZNF292O60281 2723 aa6.76□□□□□ -1.33
HPS4-201ENST00000336873 SRRM4A7MD48 611 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms