RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 FUT5Q11128 374 aa10.21□□□□□ -0.77
PCF11-201ENST00000298281 CYP2G1PQ6ZSU1 146 aa10.21□□□□□ -0.77
PCF11-201ENST00000298281 BAALCQ8WXS3 180 aa10.21□□□□□ -0.77
PCF11-201ENST00000298281 SLC50A1Q9BRV3 221 aa10.21□□□□□ -0.77
PCF11-201ENST00000298281 F12P00748 615 aaPredicted RBP10.21□□□□□ -0.78
PCF11-201ENST00000298281 TNFRSF14Q92956 283 aa10.21□□□□□ -0.78
PCF11-201ENST00000298281 HIST1H2BAQ96A08 127 aa10.21□□□□□ -0.78
PCF11-201ENST00000298281 LEPROTO15243 131 aa10.21□□□□□ -0.78
PCF11-201ENST00000298281 ERG28Q9UKR5 140 aa10.21□□□□□ -0.78
PCF11-201ENST00000298281 TCF19Q9Y242 345 aa10.21□□□□□ -0.78
PCF11-201ENST00000298281 A0A1B0GUT8 65 aa10.21□□□□□ -0.78
PCF11-201ENST00000298281 CHTOPQ9Y3Y2 248 aaKnown RBP10.21□□□□□ -0.78
PCF11-201ENST00000298281 IGLV1-36A0A0B4J1U3 117 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 KLF4O43474 513 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 ZNF250P15622 560 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 NHP2Q9NX24 153 aaKnown RBP10.2□□□□□ -0.78
PCF11-201ENST00000298281 ERCC8Q13216 396 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 SS18Q15532 418 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 ORMDL3Q8N138 153 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 LTBP4Q8N2S1 1624 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 ACACAQ13085 2346 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 TM4SF5O14894 197 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 FBXL15Q9H469 300 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 GGACTQ9BVM4 153 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 LAMB2P55268 1798 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 ARHGAP21Q5T5U3 1957 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 TRGV1A0A0A0MS02 117 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 DUSP14O95147 198 aaKnown RBP10.2□□□□□ -0.78
PCF11-201ENST00000298281 GLI3P10071 1580 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 ZMAT4Q9H898 229 aa10.2□□□□□ -0.78
PCF11-201ENST00000298281 SCN4AP35499 1836 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 PATJQ8NI35 1801 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 RCHY1Q96PM5 261 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 DKK4Q9UBT3 224 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 TRBV5-7A0A0A0MS05 114 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 ZNF98A6NK75 572 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 A8MWV9 139 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 FAM181AQ8N9Y4 354 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 Q96M66 194 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 GPHA2Q96T91 129 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 TIMM23BQ5SRD1 257 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 RPP21Q9H633 154 aaKnown RBP10.19□□□□□ -0.78
PCF11-201ENST00000298281 NPDC1Q9NQX5 325 aaPredicted RBP10.19□□□□□ -0.78
PCF11-201ENST00000298281 PILRBQ9UKJ0 227 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 LHFPL6Q9Y693 200 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 TET1Q8NFU7 2136 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 TEX48A0A1B0GUV7 120 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 IGHMP01871 453 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 LHX2P50458 406 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 SRSF1Q07955 248 aaKnown RBP eCLIP10.19□□□□□ -0.786e-9■■■□□ 15.3
PCF11-201ENST00000298281 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.19□□□□□ -0.78
PCF11-201ENST00000298281 C21orf62Q9NYP8 219 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 PLXNA1Q9UIW2 1896 aa10.19□□□□□ -0.78
PCF11-201ENST00000298281 TRAV14DV4A0A0A6YYC5 116 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 TMEM8BA6NDV4 472 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 NBEAP1P0C6P0 100 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 TMEM258P61165 79 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 Q6ZT83 130 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 SAP25Q8TEE9 199 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 WISP3O95389 354 aaPredicted RBP10.18□□□□□ -0.78
PCF11-201ENST00000298281 FAM219BQ5XKK7 198 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 NEU4Q8WWR8 484 aaPredicted RBP10.18□□□□□ -0.78
PCF11-201ENST00000298281 FMC1Q96HJ9 113 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 PRB1P04280 392 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 NMBP08949 121 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 TRAV9-2A0A087WT02 112 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 SLC22A18ASQ8N1D0 253 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 CXCL2P19875 107 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 C4orf48Q5BLP8 95 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 SIGMAR1Q99720 223 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 ARHGAP32A7KAX9 2087 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 PRTN3P24158 256 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 GAGE2AQ6NT46 116 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 ZNF600Q6ZNG1 722 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 NRTNQ99748 197 aa10.18□□□□□ -0.78
PCF11-201ENST00000298281 DSCAML1Q8TD84 2053 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 TRGV11A0A075B6L2 103 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 A0A1B0GW15 77 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 DPM2O94777 84 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 SEC61GP60059 68 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 TBR1Q16650 682 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 GAGE2BQ13066 116 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 Q6AWC8 147 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 CD200R1LQ6Q8B3 271 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 IGKV1-8A0A0C4DH67 115 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 CENPVL1A0A0U1RR11 272 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 FBLN7Q53RD9 439 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 ZNF660Q6AZW8 331 aaPredicted RBP10.17□□□□□ -0.78
PCF11-201ENST00000298281 POC1AQ8NBT0 407 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 MMP23AO75900 390 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 IGHG3P01860 377 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 C1QTNF12Q5T7M4 302 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 ZG16O60844 167 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 DANCRP0C864 163 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 TAL2Q16559 108 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 SLC25A45Q8N413 288 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 ZIC4Q8N9L1 334 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 NRN1Q9NPD7 142 aa10.17□□□□□ -0.78
PCF11-201ENST00000298281 EGR2P11161 476 aaPredicted RBP10.16□□□□□ -0.78
PCF11-201ENST00000298281 NDUFAF3Q9BU61 184 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms