RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 MAJINQ3KP22 176 aa13.04□□□□□ -0.32
USP43-201ENST00000285199 MEGF9Q9H1U4 602 aa13.04□□□□□ -0.32
USP43-201ENST00000285199 HIGD1AQ9Y241 93 aa13.04□□□□□ -0.32
USP43-201ENST00000285199 C7orf71A4D174 169 aa13.03□□□□□ -0.32
USP43-201ENST00000285199 IGHV1-2P23083 117 aa13.03□□□□□ -0.32
USP43-201ENST00000285199 GFRA1P56159 465 aa13.03□□□□□ -0.32
USP43-201ENST00000285199 ZNRD1Q9P1U0 126 aa13.03□□□□□ -0.32
USP43-201ENST00000285199 TMEM105Q8N8V8 129 aa13.03□□□□□ -0.32
USP43-201ENST00000285199 TRAV9-2A0A087WT02 112 aa13.03□□□□□ -0.32
USP43-201ENST00000285199 A0A087X0K7 114 aa13.03□□□□□ -0.32
USP43-201ENST00000285199 SAA2-SAA4A0A096LPE2 208 aa13.03□□□□□ -0.32
USP43-201ENST00000285199 TRGV8A0A0C4DH27 118 aa13.03□□□□□ -0.32
USP43-201ENST00000285199 DLL1O00548 723 aa13.03□□□□□ -0.32
USP43-201ENST00000285199 SAA2P0DJI9 122 aaPredicted RBP13.03□□□□□ -0.32
USP43-201ENST00000285199 TMEM108Q6UXF1 575 aa13.03□□□□□ -0.32
USP43-201ENST00000285199 Q1RN00 199 aa13.02□□□□□ -0.32
USP43-201ENST00000285199 MORN2Q502X0 79 aa13.02□□□□□ -0.32
USP43-201ENST00000285199 TMEM97Q5BJF2 176 aa13.02□□□□□ -0.32
USP43-201ENST00000285199 WDR82Q6UXN9 313 aa13.02□□□□□ -0.32
USP43-201ENST00000285199 LOXL4Q96JB6 756 aa13.02□□□□□ -0.32
USP43-201ENST00000285199 CLEC7AQ9BXN2 247 aa13.02□□□□□ -0.32
USP43-201ENST00000285199 IFI27L2Q9H2X8 130 aa13.02□□□□□ -0.32
USP43-201ENST00000285199 PILRBQ9UKJ0 227 aa13.02□□□□□ -0.32
USP43-201ENST00000285199 M0R296 226 aa13.02□□□□□ -0.32
USP43-201ENST00000285199 RPL7P18124 248 aaKnown RBP13.02□□□□□ -0.32
USP43-201ENST00000285199 TMEM136Q6ZRR5 245 aa13.02□□□□□ -0.32
USP43-201ENST00000285199 C17orf82Q86X59 251 aaPredicted RBP13.02□□□□□ -0.32
USP43-201ENST00000285199 STXBP6Q8NFX7 210 aa13.02□□□□□ -0.32
USP43-201ENST00000285199 SNRNP40Q96DI7 357 aaKnown RBP13.02□□□□□ -0.32
USP43-201ENST00000285199 SPAARA0A1B0GVQ0 90 aa13.02□□□□□ -0.33
USP43-201ENST00000285199 ZNF503-AS2A6NEH8 195 aa13.02□□□□□ -0.33
USP43-201ENST00000285199 KLK10O43240 276 aa13.02□□□□□ -0.33
USP43-201ENST00000285199 LINC00470Q9BZP3 86 aa13.02□□□□□ -0.33
USP43-201ENST00000285199 TRAV8-6A0A0B4J262 113 aa13.02□□□□□ -0.33
USP43-201ENST00000285199 H3BVH4 76 aa13.01□□□□□ -0.33
USP43-201ENST00000285199 DEFB123Q8N688 67 aa13.01□□□□□ -0.33
USP43-201ENST00000285199 IZUMO1RA6ND01 250 aa13.01□□□□□ -0.33
USP43-201ENST00000285199 ZNF714Q96N38 554 aa13.01□□□□□ -0.33
USP43-201ENST00000285199 TMUB1Q9BVT8 246 aa13.01□□□□□ -0.33
USP43-201ENST00000285199 TRAV8-1A0A0A6YYK1 113 aa13.01□□□□□ -0.33
USP43-201ENST00000285199 F5H697 171 aa13.01□□□□□ -0.33
USP43-201ENST00000285199 FABP2P12104 132 aa13.01□□□□□ -0.33
USP43-201ENST00000285199 SRSF9Q13242 221 aaKnown RBP eCLIP13.01□□□□□ -0.33
USP43-201ENST00000285199 STPG4Q8N801 248 aa13.01□□□□□ -0.33
USP43-201ENST00000285199 IGHV3-49A0A0A0MS15 119 aa13□□□□□ -0.33
USP43-201ENST00000285199 ZNF146Q15072 292 aa13□□□□□ -0.33
USP43-201ENST00000285199 LOC107984156A0A0G2JMH3 177 aa13□□□□□ -0.33
USP43-201ENST00000285199 Q0VFX4 171 aa13□□□□□ -0.33
USP43-201ENST00000285199 ARL17AQ8IVW1 177 aa13□□□□□ -0.33
USP43-201ENST00000285199 IDI2-AS1Q9NZ38 188 aa13□□□□□ -0.33
USP43-201ENST00000285199 PTPN13Q12923 2485 aa13□□□□□ -0.33
USP43-201ENST00000285199 PTPRQQ9UMZ3 2332 aa13□□□□□ -0.33
USP43-201ENST00000285199 FRMD6-AS1P0C7T7 363 aa13□□□□□ -0.33
USP43-201ENST00000285199 SAA1P0DJI8 122 aaPredicted RBP13□□□□□ -0.33
USP43-201ENST00000285199 Q6P435 159 aa13□□□□□ -0.33
USP43-201ENST00000285199 TMEM144Q7Z5S9 345 aa13□□□□□ -0.33
USP43-201ENST00000285199 OR10AG1Q8NH19 301 aa13□□□□□ -0.33
USP43-201ENST00000285199 RNASEH2CQ8TDP1 164 aaKnown RBP13□□□□□ -0.33
USP43-201ENST00000285199 GNB1LQ9BYB4 327 aa13□□□□□ -0.33
USP43-201ENST00000285199 MRPL20Q9BYC9 149 aaKnown RBP13□□□□□ -0.33
USP43-201ENST00000285199 MED12LQ86YW9 2145 aa13□□□□□ -0.33
USP43-201ENST00000285199 TMEM189A5PLL7 270 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 IGHV3-23P01764 117 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 PSG1P11464 419 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 TSPOP30536 169 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 PRRX1P54821 245 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 SELENOTP62341 195 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 NUDT10Q8NFP7 164 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 NUDT11Q96G61 164 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 COQ2Q96H96 371 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 IL18BPO95998 194 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 SFTPCP11686 197 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 ASCL4Q6XD76 172 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 LOC102723996A0A087X1L8 192 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 LIPFP07098 398 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 UBALD2Q8IYN6 164 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 OR52E5Q8NH55 327 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 KIF26AQ9ULI4 1882 aaPredicted RBP12.99□□□□□ -0.33
USP43-201ENST00000285199 A0A1W2PS18 150 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 FOXI3A8MTJ6 420 aaPredicted RBP12.99□□□□□ -0.33
USP43-201ENST00000285199 H7C2G1 150 aa12.99□□□□□ -0.33
USP43-201ENST00000285199 PEF1Q9UBV8 284 aaKnown RBP12.99□□□□□ -0.33
USP43-201ENST00000285199 CIDEAO60543 219 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 DNLZQ5SXM8 178 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 ZNF502Q8TBZ5 544 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 GRAMD2BQ96HH9 432 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 RCHY1Q96PM5 261 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 CSPG4Q6UVK1 2322 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 PPIAL4EA0A075B759 164 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 PPIAL4FP0DN26 164 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 C2orf83Q53S99 150 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 GFRALQ6UXV0 394 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 OSTCQ9NRP0 149 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 A0A1W2PRE2 83 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 GFRA3O60609 400 aa12.98□□□□□ -0.33
USP43-201ENST00000285199 FAM27E3Q08E93 113 aa12.97□□□□□ -0.33
USP43-201ENST00000285199 Q6ZT83 130 aa12.97□□□□□ -0.33
USP43-201ENST00000285199 TSKUQ8WUA8 353 aa12.97□□□□□ -0.33
USP43-201ENST00000285199 C21orf140B9A014 251 aa12.97□□□□□ -0.33
USP43-201ENST00000285199 FAM90A27PA6NNH2 459 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms