RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 OR5G3P0C626 314 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 ATP5J2P56134 94 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 SRSF1Q07955 248 aaKnown RBP eCLIP13.71□□□□□ -0.214e-7■□□□□ 9.3
RABGGTA-201ENST00000216840 C5orf64Q2M2E5 130 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 ISOC2Q96AB3 205 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 SMIM7Q9BQ49 75 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 C19orf24Q9BVV8 132 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 A0A087WWC5 75 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 PSMB11A5LHX3 300 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 NDUFS8O00217 210 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 CORTO00230 105 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 MT-CO2P00403 227 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 ATP5G3P48201 142 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 PNRC1Q12796 327 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 ZNF674Q2M3X9 581 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 CST9LP1Q5W188 147 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 TMEM37Q8WXS4 190 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 RPUSD4Q96CM3 377 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 PARLQ9H300 379 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 NPPCP23582 126 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 ZNF90Q03938 601 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 MALSU1Q96EH3 234 aa13.7□□□□□ -0.22
RABGGTA-201ENST00000216840 B4DEV8 164 aa13.69□□□□□ -0.22
RABGGTA-201ENST00000216840 FXYD3Q14802 87 aa13.69□□□□□ -0.22
RABGGTA-201ENST00000216840 CLEC2AQ6UVW9 174 aa13.69□□□□□ -0.22
RABGGTA-201ENST00000216840 HIST1H2BAQ96A08 127 aa13.69□□□□□ -0.22
RABGGTA-201ENST00000216840 TECRQ9NZ01 308 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-201ENST00000216840 NAT8Q9UHE5 227 aa13.69□□□□□ -0.22
RABGGTA-201ENST00000216840 IGHV3-21A0A0B4J1V1 117 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 PDE6DO43924 150 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 OR2C1O95371 312 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 TMEM116Q8NCL8 245 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 YTHDF2Q9Y5A9 579 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 CTRB1P17538 263 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 SAA4P35542 130 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 SELENOTP62341 195 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 PAX8Q06710 450 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 KIAA0141Q14154 515 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 TMEM241Q24JQ0 296 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 CTRB2Q6GPI1 263 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 TXNDC17Q9BRA2 123 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 WNT10AQ9GZT5 417 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 DNAJC4Q9NNZ3 241 aa13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 ASH1LQ9NR48 2969 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-201ENST00000216840 CLN5O75503 358 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 TMEM11P17152 192 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 OR51G1Q8NGK1 321 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 C22orf15Q8WYQ4 148 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 ZNF503Q96F45 646 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 YPEL4Q96NS1 127 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 TRGV9Q99603 122 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 FAM103A1Q9BTL3 118 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 MRPL32Q9BYC8 188 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 TNFRSF19Q9NS68 423 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 IGHV4-30-2A0A087WSY4 118 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 NCBP2LA6PVI3 153 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 F6UZH7 168 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 MT-ND4LP03901 98 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 CRYBA1P05813 215 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 FAM120AOSQ5T036 256 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 RNF2Q99496 336 aa13.67□□□□□ -0.22
RABGGTA-201ENST00000216840 CENPVL3A0A0U1RRI6 287 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 I3L2K1 104 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 NPFFO15130 113 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 TAS2R45P59539 299 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 PATE2Q6UY27 113 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 ZNF562Q6V9R5 426 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 PQLC2Q6ZP29 291 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 PIP4P2Q8N4L2 257 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 FAM24BQ8N5W8 94 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 OR4X1Q8NH49 305 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 NRGNQ92686 78 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 PERPQ96FX8 193 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 DOK5Q9P104 306 aa13.66□□□□□ -0.22
RABGGTA-201ENST00000216840 COX7A2P2O60397 106 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 C8orf88P0DMB2 117 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 CX3CL1P78423 397 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 MORN5Q5VZ52 161 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 OR1L4Q8NGR5 311 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 PFDN5Q99471 154 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 EPG5Q9HCE0 2579 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 UBR5O95071 2799 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 SPG11Q96JI7 2443 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 FAM106CPP0CH98 169 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 FOLR2P14207 255 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 COX6B1P14854 86 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 RPL23P62829 140 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 ADIRFQ15847 76 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 C10orf113Q5VZT2 155 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 FAM167A-AS1Q96KT0 104 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 SLC25A2Q9BXI2 301 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 TMEM167BQ9NRX6 74 aa13.65□□□□□ -0.22
RABGGTA-201ENST00000216840 UTP20O75691 2785 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-201ENST00000216840 TRAV5A0A0B4J249 113 aa13.64□□□□□ -0.23
RABGGTA-201ENST00000216840 OR7C2O60412 319 aa13.64□□□□□ -0.23
RABGGTA-201ENST00000216840 NDUFB4O95168 129 aa13.64□□□□□ -0.23
RABGGTA-201ENST00000216840 BRS3P32247 399 aa13.64□□□□□ -0.23
RABGGTA-201ENST00000216840 BPIFB3P59826 476 aa13.64□□□□□ -0.23
RABGGTA-201ENST00000216840 NDPQ00604 133 aa13.64□□□□□ -0.23
RABGGTA-201ENST00000216840 ASPHD1Q5U4P2 390 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms