RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SPSB3Q6PJ21 355 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 CENPSQ8N2Z9 138 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 DUSP18Q8NEJ0 188 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 OR1S1Q8NH92 325 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 LHFPL5Q8TAF8 219 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 TMEM230Q96A57 120 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 BSCL2Q96G97 398 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-227ENST00000591849 C20orf24Q9BUV8 137 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 HIPK2Q9H2X6 1198 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 UFC1Q9Y3C8 167 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 DMRT1Q9Y5R6 373 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 A0A0B4J2A0 478 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 C2orf70A6NJV1 201 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 K7EIM0 57 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 CORTO00230 105 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 GNG7O60262 68 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 SCGB2A1O75556 95 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 YIF1AO95070 293 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 NXPH3O95157 252 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 IL7P13232 177 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 FOLR2P14207 255 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 NPBWR1P48145 328 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 CCR6P51684 374 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 RELQ04864 619 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-227ENST00000591849 SMCO1Q147U7 214 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 RBMS2Q15434 407 aaKnown RBP7.67□□□□□ -1.18
BRCA1-227ENST00000591849 GUCA2BQ16661 112 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 IL34Q6ZMJ4 242 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 Q6ZRM9 215 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 LYZL2Q7Z4W2 148 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 GTSCR1Q86UQ5 136 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 NOXA1Q86UR1 476 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 ZNF114Q8NC26 417 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 OR2K2Q8NGT1 345 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 OR52E5Q8NH55 327 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 ATP6V0BQ99437 205 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 TXN2Q99757 166 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 C7orf50Q9BRJ6 194 aaKnown RBP7.67□□□□□ -1.18
BRCA1-227ENST00000591849 SIGLEC8Q9NYZ4 499 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 TECRQ9NZ01 308 aaKnown RBP7.67□□□□□ -1.18
BRCA1-227ENST00000591849 SHPKQ9UHJ6 478 aa7.67□□□□□ -1.18
BRCA1-227ENST00000591849 RPS10-NUDT3A0A1W2PQS6 291 aa7.66□□□□□ -1.18
BRCA1-227ENST00000591849 SFT2D2O95562 160 aa7.66□□□□□ -1.18
BRCA1-227ENST00000591849 IGHV3-48P01763 117 aa7.66□□□□□ -1.18
BRCA1-227ENST00000591849 CBLN1P23435 193 aa7.66□□□□□ -1.18
BRCA1-227ENST00000591849 OPRK1P41145 380 aa7.66□□□□□ -1.18
BRCA1-227ENST00000591849 HTR2BP41595 481 aa7.66□□□□□ -1.18
BRCA1-227ENST00000591849 TM4SF20Q53R12 229 aa7.66□□□□□ -1.18
BRCA1-227ENST00000591849 UXS1Q8NBZ7 420 aa7.66□□□□□ -1.18
BRCA1-227ENST00000591849 A0A1B0GU03 582 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 DUXBA0A1W2PPF3 345 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 INS-IGF2F8WCM5 200 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 I3L2K1 104 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 NDUFA4O00483 81 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 NDUFB6O95139 128 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 IFNA10P01566 189 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 RNASE2P10153 161 aaKnown RBP7.65□□□□□ -1.18
BRCA1-227ENST00000591849 ELLP55199 621 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-227ENST00000591849 UBE2MP61081 183 aaKnown RBP7.65□□□□□ -1.18
BRCA1-227ENST00000591849 SUPT4H1P63272 117 aaKnown RBP7.65□□□□□ -1.18
BRCA1-227ENST00000591849 PPP1R1AQ13522 171 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 DEFB114Q30KQ6 69 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 CNPY1Q3B7I2 92 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 CD300EQ496F6 205 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-227ENST00000591849 C4orf46Q504U0 113 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 RBPMS2Q6ZRY4 209 aaKnown RBP7.65□□□□□ -1.18
BRCA1-227ENST00000591849 COQ8AQ8NI60 647 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 S100ZQ8WXG8 99 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 MARC2Q969Z3 335 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 ASCL2Q99929 193 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 B9D2Q9BPU9 175 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 CHRDL1Q9BU40 450 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 ZNF436Q9C0F3 470 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-227ENST00000591849 TUBA4BQ9H853 241 aa7.65□□□□□ -1.18
BRCA1-227ENST00000591849 MRPL27Q9P0M9 148 aaKnown RBP7.65□□□□□ -1.18
BRCA1-227ENST00000591849 LSM4Q9Y4Z0 139 aaKnown RBP7.65□□□□□ -1.18
BRCA1-227ENST00000591849 A6NHS1 94 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 ZNF207O43670 478 aaKnown RBP7.64□□□□□ -1.19
BRCA1-227ENST00000591849 MED6O75586 246 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 IFNA21P01568 189 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 HOXB5P09067 269 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 ANKRD55Q3KP44 614 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 UNQ9165/PRO28630Q6UXU0 137 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 SLC24A4Q8NFF2 622 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 DTD1Q8TEA8 209 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 CACNG8Q8WXS5 425 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 SDHCQ99643 169 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-227ENST00000591849 CCDC32Q9BV29 185 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 PAIP2BQ9ULR5 123 aaKnown RBP7.64□□□□□ -1.19
BRCA1-227ENST00000591849 FLVCR2Q9UPI3 526 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 TMED3Q9Y3Q3 217 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 SELENOKQ9Y6D0 94 aa7.64□□□□□ -1.19
BRCA1-227ENST00000591849 IGHV3OR16-8A0A075B7F1 116 aa7.63□□□□□ -1.19
BRCA1-227ENST00000591849 TMEM213A2RRL7 107 aa7.63□□□□□ -1.19
BRCA1-227ENST00000591849 C9orf170A2RU37 121 aa7.63□□□□□ -1.19
BRCA1-227ENST00000591849 IZUMO1RA6ND01 250 aa7.63□□□□□ -1.19
BRCA1-227ENST00000591849 A8MWP6 167 aa7.63□□□□□ -1.19
BRCA1-227ENST00000591849 LYRM1O43325 122 aa7.63□□□□□ -1.19
BRCA1-227ENST00000591849 IFNA4P05014 189 aa7.63□□□□□ -1.19
BRCA1-227ENST00000591849 CTSGP08311 255 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms