RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, human

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-219	ENST00000589349	FCAMR	Q8WWV6	532 aa		6.24	□□□□□ -1.41
DNMT1-219	ENST00000589349	CXorf58	Q96LI9	332 aa		6.24	□□□□□ -1.41
DNMT1-219	ENST00000589349	NAA50	Q9GZZ1	169 aa	Known RBP	6.24	□□□□□ -1.41
DNMT1-219	ENST00000589349	PLEKHA2	Q9HB19	425 aa		6.24	□□□□□ -1.41
DNMT1-219	ENST00000589349	PLEKHA3	Q9HB20	300 aa		6.24	□□□□□ -1.41
DNMT1-219	ENST00000589349	COMMD9	Q9P000	198 aa		6.24	□□□□□ -1.41
DNMT1-219	ENST00000589349	TRBV7-1	A0A0A6YYK4	115 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	TRBV9	A0A0B4J1U6	114 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	TEX50	A0A1B0GTY4	177 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	IZUMO1R	A6ND01	250 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	OR2T8	A6NH00	312 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	RBFOX2	O43251	390 aa	Known RBP eCLIP	6.23	□□□□□ -1.41	2e-9	■■□□□ 13.2
DNMT1-219	ENST00000589349	YIF1A	O95070	293 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	BRI3	O95415	125 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	FOLR2	P14207	255 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	ZNF182	P17025	639 aa	Predicted RBP	6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	PPP5C	P53041	499 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	EIF4EBP1	Q13541	118 aa	Predicted RBP	6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	TRIM16L	Q309B1	348 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	TMEM88	Q6PEY1	159 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	RBPMS2	Q6ZRY4	209 aa	Known RBP	6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	CLVS1	Q8IUQ0	354 aa	Predicted RBP	6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	SLC38A6	Q8IZM9	456 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	NRAC	Q8N912	160 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	GPX8	Q8TED1	209 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	CACNG8	Q8WXS5	425 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	TMEM56	Q96MV1	263 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	C20orf24	Q9BUV8	137 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	MRPS26	Q9BYN8	205 aa	Known RBP	6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	FXYD6	Q9H0Q3	95 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	SCPEP1	Q9HB40	452 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	FKBP11	Q9NYL4	201 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	PRND	Q9UKY0	176 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	SORL1	Q92673	2214 aa		6.23	□□□□□ -1.41
DNMT1-219	ENST00000589349	PRKDC	P78527	4128 aa	Known RBP	6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	MFSD2B	A6NFX1	497 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	CCDC160	A6NGH7	325 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	C2orf70	A6NJV1	201 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	CTRB1	P17538	263 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	AKR1C2	P52895	323 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	ZNF585B	Q52M93	769 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	SPINK9	Q5DT21	86 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	ZNF57	Q68EA5	555 aa	Predicted RBP	6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	CTRB2	Q6GPI1	263 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	SLC16A13	Q7RTY0	426 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349		Q8N9P0	234 aa	Predicted RBP	6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	UXS1	Q8NBZ7	420 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	OR52I2	Q8NH67	350 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	LSM10	Q969L4	123 aa	Known RBP	6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	PINX1	Q96BK5	328 aa	Known RBP	6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	CMTM3	Q96MX0	182 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	TSC22D3	Q99576	134 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	NEURL2	Q9BR09	285 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	PDCD10	Q9BUL8	212 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	ENY2	Q9NPA8	101 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	COPZ2	Q9P299	210 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	KLK11	Q9UBX7	282 aa		6.22	□□□□□ -1.41
DNMT1-219	ENST00000589349	IGHV3OR16-8	A0A075B7F1	116 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349		A0A1B0GW64	132 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	IGLC7	A0M8Q6	106 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	ZNF207	O43670	478 aa	Known RBP	6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	RAB3D	O95716	219 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	IFNA17	P01571	189 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	CRYGC	P07315	174 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	EDN2	P20800	178 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	CBLN1	P23435	193 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	PIGP	P57054	158 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	IL18	Q14116	193 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	DEFB114	Q30KQ6	69 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	ZFAND6	Q6FIF0	208 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	IL34	Q6ZMJ4	242 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	GDPD1	Q8N9F7	314 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	OR52B4	Q8NGK2	314 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	C15orf40	Q8WUR7	153 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	MRGPRF	Q96AM1	343 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	DIRAS2	Q96HU8	199 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	SRSF8	Q9BRL6	282 aa	Known RBP	6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	C6orf62	Q9GZU0	229 aa	Predicted RBP	6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	TECR	Q9NZ01	308 aa	Known RBP	6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	UFC1	Q9Y3C8	167 aa		6.21	□□□□□ -1.42
DNMT1-219	ENST00000589349	TNC	P24821	2201 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	IGLV11-55	A0A075B6I3	123 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	OR11H12	B2RN74	326 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	ATG12	O94817	140 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	GABARAP	O95166	117 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	IGHV3-48	P01763	117 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	CD3D	P04234	171 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	CD7	P09564	240 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	SMIM18	P0DKX4	95 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	LYL1	P12980	280 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	PTBP1	P26599	531 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	SNCA	P37840	140 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	TAS2R19	P59542	299 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	ERH	P84090	104 aa	Known RBP	6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	CTF1	Q16619	201 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	ANKRD55	Q3KP44	614 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	SP6	Q3SY56	376 aa		6.2	□□□□□ -1.42
DNMT1-219	ENST00000589349	THOC7	Q6I9Y2	204 aa	Known RBP	6.2	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms