RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 MYOZ3Q8TDC0 251 aa10.76□□□□□ -0.69
TRAF4-215ENST00000584944 P2RX4Q99571 388 aa10.76□□□□□ -0.69
TRAF4-215ENST00000584944 PEF1Q9UBV8 284 aaKnown RBP10.76□□□□□ -0.69
TRAF4-215ENST00000584944 IGLV11-55A0A075B6I3 123 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 RPS10-NUDT3A0A1W2PQS6 291 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 LINC01619G3V211 115 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 CCSO14618 274 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 GOSR2O14653 212 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 SYNGR2O43760 224 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 NDUFB8O95169 186 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 HSPB1P04792 205 aaKnown RBP10.75□□□□□ -0.69
TRAF4-215ENST00000584944 IFNA4P05014 189 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 SPNP16150 400 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 ZP3P21754 424 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 OPRK1P41145 380 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 RAB11AP62491 216 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 AARDQ4LEZ3 155 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 Q56UQ5 140 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 C18orf65Q6ZTR6 163 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 ZNF114Q8NC26 417 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 RAX2Q96IS3 184 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 DUX3Q96PT4 197 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 MAGT1Q9H0U3 335 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 GAR1Q9NY12 217 aaKnown RBP10.75□□□□□ -0.69
TRAF4-215ENST00000584944 U3KQ87 197 aa10.75□□□□□ -0.69
TRAF4-215ENST00000584944 ADARB2-AS1A8MUL3 147 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 INS-IGF2F8WCM5 200 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 L7N2F9 121 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 SSSCA1O60232 199 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 IGHV3-23P01764 117 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 IAPPP10997 89 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 PVALBP20472 110 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-215ENST00000584944 NPY1RP25929 384 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 ATP5IP56385 69 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-215ENST00000584944 S100A10P60903 97 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 VAMP2P63027 116 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 RUNX1Q01196 453 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 RPEL1Q2QD12 228 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 ETFRF1Q6IPR1 90 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 ZBTB8BQ8NAP8 495 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-215ENST00000584944 VN1R17PQ8TDU5 208 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 S4R3C0 116 aa10.74□□□□□ -0.69
TRAF4-215ENST00000584944 IGHV3-21A0A0B4J1V1 117 aa10.73□□□□□ -0.69
TRAF4-215ENST00000584944 I3L521 148 aa10.73□□□□□ -0.69
TRAF4-215ENST00000584944 ARL3P36405 182 aa10.73□□□□□ -0.69
TRAF4-215ENST00000584944 CYCSP99999 105 aaKnown RBP10.73□□□□□ -0.69
TRAF4-215ENST00000584944 ZNF343Q6P1L6 599 aa10.73□□□□□ -0.69
TRAF4-215ENST00000584944 ACSM6Q6P461 480 aa10.73□□□□□ -0.69
TRAF4-215ENST00000584944 CLEC19AQ6UXS0 136 aa10.73□□□□□ -0.69
TRAF4-215ENST00000584944 C2orf50Q96LR7 162 aa10.73□□□□□ -0.69
TRAF4-215ENST00000584944 FANCD2OSQ96PS1 177 aa10.73□□□□□ -0.69
TRAF4-215ENST00000584944 C21orf62Q9NYP8 219 aa10.73□□□□□ -0.69
TRAF4-215ENST00000584944 IGHV4OR15-8A0A075B7B6 117 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 A0A087WW49 117 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 MPTX1A8MV57 137 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 GNG7O60262 68 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 PITX3O75364 302 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 MT-CO2P00403 227 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 RLN2P04090 185 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 RNASE2P10153 161 aaKnown RBP10.72□□□□□ -0.69
TRAF4-215ENST00000584944 GPR183P32249 361 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 NPBWR1P48145 328 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 MFAP4P55083 255 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 KIAA0141Q14154 515 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-215ENST00000584944 ETV3LQ6ZN32 361 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 OR10C1Q96KK4 312 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 MCRIP2Q9BUT9 160 aaKnown RBP10.72□□□□□ -0.69
TRAF4-215ENST00000584944 MED28Q9H204 178 aa10.72□□□□□ -0.69
TRAF4-215ENST00000584944 STRAPQ9Y3F4 350 aaKnown RBP10.72□□□□□ -0.69
TRAF4-215ENST00000584944 LSM5Q9Y4Y9 91 aaKnown RBP10.72□□□□□ -0.69
TRAF4-215ENST00000584944 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.71□□□□□ -0.69
TRAF4-215ENST00000584944 MFSD2BA6NFX1 497 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 NUPL2O15504 423 aaKnown RBP10.71□□□□□ -0.69
TRAF4-215ENST00000584944 GGCTO75223 188 aaKnown RBP10.71□□□□□ -0.69
TRAF4-215ENST00000584944 CLEC3BP05452 202 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.69
TRAF4-215ENST00000584944 BCAP31P51572 246 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 POLR2GP62487 172 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRAF4-215ENST00000584944 C2orf83Q53S99 150 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 SPANXN5Q5MJ07 72 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 OR4D5Q8NGN0 318 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 RNASEH2CQ8TDP1 164 aaKnown RBP10.71□□□□□ -0.69
TRAF4-215ENST00000584944 SCARB1Q8WTV0 552 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 DCUN1D4Q92564 292 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 RAB40CQ96S21 281 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 ELOVL1Q9BW60 279 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 GPR61Q9BZJ8 451 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 PSENENQ9NZ42 101 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 MGAT4CQ9UBM8 478 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 ALG5Q9Y673 324 aa10.71□□□□□ -0.69
TRAF4-215ENST00000584944 OR2T8A6NH00 312 aa10.7□□□□□ -0.7
TRAF4-215ENST00000584944 PPP5D1E7EU14 171 aa10.7□□□□□ -0.7
TRAF4-215ENST00000584944 SLC25A4P12235 298 aa10.7□□□□□ -0.7
TRAF4-215ENST00000584944 ID3Q02535 119 aa10.7□□□□□ -0.7
TRAF4-215ENST00000584944 FAM106AQ4KMX7 169 aa10.7□□□□□ -0.7
TRAF4-215ENST00000584944 SPSB3Q6PJ21 355 aa10.7□□□□□ -0.7
TRAF4-215ENST00000584944 BSCL2Q96G97 398 aaPredicted RBP10.7□□□□□ -0.7
TRAF4-215ENST00000584944 TXN2Q99757 166 aa10.7□□□□□ -0.7
TRAF4-215ENST00000584944 ZC4H2Q9NQZ6 224 aa10.7□□□□□ -0.7
TRAF4-215ENST00000584944 ZNF320A2RRD8 509 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms