RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 OR11H12B2RN74 326 aa13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 NUPL2O15504 423 aaKnown RBP13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 SURF2Q15527 256 aaPredicted RBP13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 SPSB3Q6PJ21 355 aa13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 Q6ZRM9 215 aa13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 RBPMS2Q6ZRY4 209 aaKnown RBP13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 ZNF114Q8NC26 417 aa13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 OR52B4Q8NGK2 314 aa13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 MARC2Q969Z3 335 aa13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 SOSTQ9BQB4 213 aa13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 TMEM222Q9H0R3 208 aa13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 SRD5A3Q9H8P0 318 aa13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 RETNQ9HD89 108 aa13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 PRR13Q9NZ81 148 aa13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 GPR132Q9UNW8 380 aa13.36□□□□□ -0.27
CTDNEP1-207ENST00000572043 NDUFA4O00483 81 aa13.35□□□□□ -0.27
CTDNEP1-207ENST00000572043 YIF1AO95070 293 aa13.35□□□□□ -0.27
CTDNEP1-207ENST00000572043 C8orf88P0DMB2 117 aa13.35□□□□□ -0.27
CTDNEP1-207ENST00000572043 SNCAP37840 140 aa13.35□□□□□ -0.27
CTDNEP1-207ENST00000572043 MFAP4P55083 255 aa13.35□□□□□ -0.27
CTDNEP1-207ENST00000572043 ELLP55199 621 aaPredicted RBP13.35□□□□□ -0.27
CTDNEP1-207ENST00000572043 PYDC2Q56P42 97 aa13.35□□□□□ -0.27
CTDNEP1-207ENST00000572043 TMEM268Q5VZI3 342 aa13.35□□□□□ -0.27
CTDNEP1-207ENST00000572043 SLC16A13Q7RTY0 426 aa13.35□□□□□ -0.27
CTDNEP1-207ENST00000572043 GLYATL2Q8WU03 294 aa13.35□□□□□ -0.27
CTDNEP1-207ENST00000572043 ENY2Q9NPA8 101 aa13.35□□□□□ -0.27
CTDNEP1-207ENST00000572043 DAZ1Q9NQZ3 744 aaKnown RBP13.35□□□□□ -0.27
CTDNEP1-207ENST00000572043 SORL1Q92673 2214 aa13.34□□□□□ -0.27
CTDNEP1-207ENST00000572043 CRYM-AS1A6NIL9 109 aa13.34□□□□□ -0.27
CTDNEP1-207ENST00000572043 B3GALNT1O75752 331 aa13.34□□□□□ -0.27
CTDNEP1-207ENST00000572043 NXPH3O95157 252 aa13.34□□□□□ -0.27
CTDNEP1-207ENST00000572043 CDS2O95674 445 aa13.34□□□□□ -0.27
CTDNEP1-207ENST00000572043 CTSGP08311 255 aa13.34□□□□□ -0.27
CTDNEP1-207ENST00000572043 SELENOHQ8IZQ5 122 aaKnown RBP13.34□□□□□ -0.27
CTDNEP1-207ENST00000572043 SPATA25Q9BR10 227 aa13.34□□□□□ -0.27
CTDNEP1-207ENST00000572043 SCP2D1Q9UJQ7 156 aa13.34□□□□□ -0.27
CTDNEP1-207ENST00000572043 IGHV3-49A0A0A0MS15 119 aa13.33□□□□□ -0.28
CTDNEP1-207ENST00000572043 RBMY1BA6NDE4 496 aaKnown RBP13.33□□□□□ -0.28
CTDNEP1-207ENST00000572043 RBMY1EA6NEQ0 496 aaKnown RBP13.33□□□□□ -0.28
CTDNEP1-207ENST00000572043 GNG7O60262 68 aa13.33□□□□□ -0.28
CTDNEP1-207ENST00000572043 RBMY1DP0C7P1 496 aaKnown RBP13.33□□□□□ -0.28
CTDNEP1-207ENST00000572043 DHODHQ02127 395 aa13.33□□□□□ -0.28
CTDNEP1-207ENST00000572043 RBPMSQ93062 196 aaKnown RBP13.33□□□□□ -0.28
CTDNEP1-207ENST00000572043 TMEM230Q96A57 120 aa13.33□□□□□ -0.28
CTDNEP1-207ENST00000572043 GPR146Q96CH1 333 aa13.33□□□□□ -0.28
CTDNEP1-207ENST00000572043 ATP6V0BQ99437 205 aa13.33□□□□□ -0.28
CTDNEP1-207ENST00000572043 GAR1Q9NY12 217 aaKnown RBP13.33□□□□□ -0.28
CTDNEP1-207ENST00000572043 CACNG5Q9UF02 275 aa13.33□□□□□ -0.28
CTDNEP1-207ENST00000572043 RNASE2P10153 161 aaKnown RBP13.32□□□□□ -0.28
CTDNEP1-207ENST00000572043 AKR1C4P17516 323 aa13.32□□□□□ -0.28
CTDNEP1-207ENST00000572043 RELQ04864 619 aaPredicted RBP13.32□□□□□ -0.28
CTDNEP1-207ENST00000572043 ZNF414Q96IQ9 312 aa13.32□□□□□ -0.28
CTDNEP1-207ENST00000572043 FAM110AQ9BQ89 295 aa13.32□□□□□ -0.28
CTDNEP1-207ENST00000572043 UBQLN2Q9UHD9 624 aa13.32□□□□□ -0.28
CTDNEP1-207ENST00000572043 V9GYH0 126 aa13.32□□□□□ -0.28
CTDNEP1-207ENST00000572043 HUWE1Q7Z6Z7 4374 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-207ENST00000572043 COL7A1Q02388 2944 aa13.31□□□□□ -0.28
CTDNEP1-207ENST00000572043 S100A5P33763 92 aa13.31□□□□□ -0.28
CTDNEP1-207ENST00000572043 SUB1P53999 127 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTDNEP1-207ENST00000572043 ANKRD55Q3KP44 614 aa13.31□□□□□ -0.28
CTDNEP1-207ENST00000572043 LINC00322Q6ZN03 302 aaPredicted RBP13.31□□□□□ -0.28
CTDNEP1-207ENST00000572043 FAM219AQ8IW50 185 aa13.31□□□□□ -0.28
CTDNEP1-207ENST00000572043 DUSP18Q8NEJ0 188 aa13.31□□□□□ -0.28
CTDNEP1-207ENST00000572043 MUC7Q8TAX7 377 aa13.31□□□□□ -0.28
CTDNEP1-207ENST00000572043 TXN2Q99757 166 aa13.31□□□□□ -0.28
CTDNEP1-207ENST00000572043 RBM38Q9H0Z9 239 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-207ENST00000572043 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.31□□□□□ -0.28
CTDNEP1-207ENST00000572043 IGHV3OR16-13A0A075B7E8 117 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 IGHV3-74A0A0B4J1X5 117 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 TRAV25A0A0B4J276 109 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 C15orf62A8K5M9 175 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 INS-IGF2F8WCM5 200 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 K7EMT4 169 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 OPRK1P41145 380 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 SPCS3P61009 180 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 KLF9Q13886 244 aaPredicted RBP13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 MLANAQ16655 118 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 TOMM5Q8N4H5 51 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 TRIM63Q969Q1 353 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 SCGB3A2Q96PL1 93 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 CITED4Q96RK1 184 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 KCNIP3Q9Y2W7 256 aa13.3□□□□□ -0.28
CTDNEP1-207ENST00000572043 IGKV3-7A0A075B6H7 116 aa13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 CEBPZOSA8MTT3 80 aa13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 C3orf84H3BNL1 204 aa13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 FCGR2BP31994 310 aaPredicted RBP13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 FAUP35544 74 aaKnown RBP13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 NPBWR1P48145 328 aa13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 TMEM187Q14656 261 aa13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 ZNF79Q15937 498 aa13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 LAMTOR1Q6IAA8 161 aa13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 TMED4Q7Z7H5 227 aa13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 HIPK2Q9H2X6 1198 aa13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 MRPL36Q9P0J6 103 aaKnown RBP13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 SMPXQ9UHP9 88 aa13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 TMEM56-RWDD3S4R434 201 aa13.29□□□□□ -0.28
CTDNEP1-207ENST00000572043 IGHV7-4-1A0A0J9YVY3 117 aa13.28□□□□□ -0.28
CTDNEP1-207ENST00000572043 AP3S2P59780 193 aa13.28□□□□□ -0.28
CTDNEP1-207ENST00000572043 TMEM116Q8NCL8 245 aa13.28□□□□□ -0.28
CTDNEP1-207ENST00000572043 OR52E5Q8NH55 327 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms