RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 MISP3Q96FF7 219 aa16.49■□□□□ 0.23
NME3-210ENST00000567271 ATP6V0BQ99437 205 aa16.49■□□□□ 0.23
NME3-210ENST00000567271 ENY2Q9NPA8 101 aa16.49■□□□□ 0.23
NME3-210ENST00000567271 C21orf62Q9NYP8 219 aa16.49■□□□□ 0.23
NME3-210ENST00000567271 SIGLEC8Q9NYZ4 499 aa16.49■□□□□ 0.23
NME3-210ENST00000567271 PEMTQ9UBM1 199 aa16.49■□□□□ 0.23
NME3-210ENST00000567271 DUXBA0A1W2PPF3 345 aa16.48■□□□□ 0.23
NME3-210ENST00000567271 I3L2K1 104 aa16.48■□□□□ 0.23
NME3-210ENST00000567271 PVRIGQ6DKI7 326 aa16.48■□□□□ 0.23
NME3-210ENST00000567271 ZC4H2Q9NQZ6 224 aa16.48■□□□□ 0.23
NME3-210ENST00000567271 CACFD1Q9UGQ2 172 aa16.48■□□□□ 0.23
NME3-210ENST00000567271 ZNF256Q9Y2P7 627 aaPredicted RBP16.48■□□□□ 0.23
NME3-210ENST00000567271 F8W735 103 aaPredicted RBP16.47■□□□□ 0.23
NME3-210ENST00000567271 LGALS9O00182 355 aa16.47■□□□□ 0.23
NME3-210ENST00000567271 LYRM1O43325 122 aa16.47■□□□□ 0.23
NME3-210ENST00000567271 IGLV1-51P01701 117 aa16.47■□□□□ 0.23
NME3-210ENST00000567271 RNASE2P10153 161 aaKnown RBP16.47■□□□□ 0.23
NME3-210ENST00000567271 SMCO1Q147U7 214 aa16.47■□□□□ 0.23
NME3-210ENST00000567271 FAM106AQ4KMX7 169 aa16.47■□□□□ 0.23
NME3-210ENST00000567271 PLET1Q6UQ28 207 aa16.47■□□□□ 0.23
NME3-210ENST00000567271 HAPLN4Q86UW8 402 aa16.47■□□□□ 0.23
NME3-210ENST00000567271 PRR25Q96S07 402 aa16.47■□□□□ 0.23
NME3-210ENST00000567271 A0A1B0GU03 582 aa16.46■□□□□ 0.23
NME3-210ENST00000567271 OR2T8A6NH00 312 aa16.46■□□□□ 0.23
NME3-210ENST00000567271 TGOLN2O43493 480 aa16.46■□□□□ 0.23
NME3-210ENST00000567271 MT-CO2P00403 227 aa16.46■□□□□ 0.23
NME3-210ENST00000567271 SPNP16150 400 aa16.46■□□□□ 0.23
NME3-210ENST00000567271 SUB1P53999 127 aaKnown RBP eCLIP16.46■□□□□ 0.23
NME3-210ENST00000567271 BSXQ3C1V8 233 aa16.46■□□□□ 0.23
NME3-210ENST00000567271 BSCL2Q96G97 398 aaPredicted RBP16.46■□□□□ 0.23
NME3-210ENST00000567271 DNAH9Q9NYC9 4486 aa16.45■□□□□ 0.22
NME3-210ENST00000567271 C9orf170A2RU37 121 aa16.45■□□□□ 0.22
NME3-210ENST00000567271 FCGR2BP31994 310 aaPredicted RBP16.45■□□□□ 0.22
NME3-210ENST00000567271 PINX1Q96BK5 328 aaKnown RBP16.45■□□□□ 0.22
NME3-210ENST00000567271 SORL1Q92673 2214 aa16.45■□□□□ 0.22
NME3-210ENST00000567271 TGP01266 2768 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 ZNF320A2RRD8 509 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 CEBPZOSA8MTT3 80 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 NXPH3O95157 252 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 OR4E1P0C645 316 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 ANXA7P20073 488 aaKnown RBP16.44■□□□□ 0.22
NME3-210ENST00000567271 MFAP4P55083 255 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 ZNF846Q147U1 533 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 Q56UQ5 140 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 DEFB121Q5J5C9 76 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 SPSB3Q6PJ21 355 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 ADAMTSL5Q6ZMM2 481 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 UBAC2Q8NBM4 344 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 TXN2Q99757 166 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 CHRDL1Q9BU40 450 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 WDR12Q9GZL7 423 aaKnown RBP16.44■□□□□ 0.22
NME3-210ENST00000567271 HEYLQ9NQ87 328 aaPredicted RBP16.44■□□□□ 0.22
NME3-210ENST00000567271 HSPB7Q9UBY9 170 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 TMED3Q9Y3Q3 217 aa16.44■□□□□ 0.22
NME3-210ENST00000567271 C2orf70A6NJV1 201 aa16.43■□□□□ 0.22
NME3-210ENST00000567271 LY86O95711 162 aa16.43■□□□□ 0.22
NME3-210ENST00000567271 CTSGP08311 255 aa16.43■□□□□ 0.22
NME3-210ENST00000567271 HTR2BP41595 481 aa16.43■□□□□ 0.22
NME3-210ENST00000567271 TNFRSF9Q07011 255 aa16.43■□□□□ 0.22
NME3-210ENST00000567271 ZNF436Q9C0F3 470 aaPredicted RBP16.43■□□□□ 0.22
NME3-210ENST00000567271 GAR1Q9NY12 217 aaKnown RBP16.43■□□□□ 0.22
NME3-210ENST00000567271 IGHV3-35A0A0C4DH35 117 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 A8MWP6 167 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 CORTO00230 105 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 PITX3O75364 302 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 IGHV3-48P01763 117 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 SLC25A6P12236 298 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 FOLR2P14207 255 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 EDN2P20800 178 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 ADMP35318 185 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 DHRS2Q13268 280 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 UNQ9165/PRO28630Q6UXU0 137 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 LYG2Q86SG7 212 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 OR1S1Q8NH92 325 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 HIPK2Q9H2X6 1198 aa16.42■□□□□ 0.22
NME3-210ENST00000567271 TCRBP04435 133 aa16.41■□□□□ 0.22
NME3-210ENST00000567271 HOXB5P09067 269 aa16.41■□□□□ 0.22
NME3-210ENST00000567271 GP9P14770 177 aa16.41■□□□□ 0.22
NME3-210ENST00000567271 C4orf46Q504U0 113 aa16.41■□□□□ 0.22
NME3-210ENST00000567271 C2orf83Q53S99 150 aa16.41■□□□□ 0.22
NME3-210ENST00000567271 C20orf85Q9H1P6 137 aa16.41■□□□□ 0.22
NME3-210ENST00000567271 RBKSQ9H477 322 aa16.41■□□□□ 0.22
NME3-210ENST00000567271 LSM4Q9Y4Z0 139 aaKnown RBP16.41■□□□□ 0.22
NME3-210ENST00000567271 TMEM213A2RRL7 107 aa16.4■□□□□ 0.22
NME3-210ENST00000567271 CBLN1P23435 193 aa16.4■□□□□ 0.22
NME3-210ENST00000567271 DCTN2Q13561 401 aaKnown RBP16.4■□□□□ 0.22
NME3-210ENST00000567271 C11orf87Q6NUJ2 197 aa16.4■□□□□ 0.22
NME3-210ENST00000567271 DUSP18Q8NEJ0 188 aa16.4■□□□□ 0.22
NME3-210ENST00000567271 SLC24A4Q8NFF2 622 aa16.4■□□□□ 0.22
NME3-210ENST00000567271 COQ8AQ8NI60 647 aa16.4■□□□□ 0.22
NME3-210ENST00000567271 DTD1Q8TEA8 209 aa16.4■□□□□ 0.22
NME3-210ENST00000567271 PALMDQ9NP74 551 aa16.4■□□□□ 0.22
NME3-210ENST00000567271 TBC1D24Q9ULP9 559 aa16.4■□□□□ 0.22
NME3-210ENST00000567271 NDUFA4O00483 81 aa16.39■□□□□ 0.21
NME3-210ENST00000567271 NUPL2O15504 423 aaKnown RBP16.39■□□□□ 0.21
NME3-210ENST00000567271 UPK1BO75841 260 aa16.39■□□□□ 0.21
NME3-210ENST00000567271 NPBWR1P48145 328 aa16.39■□□□□ 0.21
NME3-210ENST00000567271 ELLP55199 621 aaPredicted RBP16.39■□□□□ 0.21
NME3-210ENST00000567271 ASAH1Q13510 395 aa16.39■□□□□ 0.21
NME3-210ENST00000567271 TM4SF20Q53R12 229 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms