RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 A0A1W2PN81 502 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 INS-IGF2F8WCM5 200 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 DEFA6Q01524 100 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 ZNF90Q03938 601 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 LINC00311Q8N616 119 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 C8orf31Q8N9H6 132 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 OR2T6Q8NHC8 308 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 VSTM2AQ8TAG5 236 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 WFIKKN1Q96NZ8 548 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 GATCO43716 136 aaKnown RBP16.19■□□□□ 0.18
MSLN-205ENST00000563941 OR10J4P0C629 311 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 LOXP28300 417 aaPredicted RBP16.19■□□□□ 0.18
MSLN-205ENST00000563941 GPX4P36969 197 aaPredicted RBP16.19■□□□□ 0.18
MSLN-205ENST00000563941 CENPWQ5EE01 88 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 ST6GALNAC6Q969X2 333 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 PRO1933Q9H354 126 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 DYNLRB1Q9NP97 96 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 ROS1P08922 2347 aa16.19■□□□□ 0.18
MSLN-205ENST00000563941 DCHS1Q96JQ0 3298 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 TRAV9-1A0A075B6T8 112 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 HELTA6NFD8 242 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 CGB1A6NKQ9 187 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 TSTD3H0UI37 97 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 ADMP35318 185 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 GNG4P50150 75 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 YPEL3P61236 119 aaPredicted RBP16.18■□□□□ 0.18
MSLN-205ENST00000563941 C10orf55Q5SWW7 151 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 GBGT1Q8N5D6 347 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 WASHC3Q9Y3C0 194 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 SMG1Q96Q15 3661 aaKnown RBP16.18■□□□□ 0.18
MSLN-205ENST00000563941 SHISA9B4DS77 424 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 GGTLC3B5MD39 225 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 IGLV2-23P01705 113 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 C8orf88P0DMB2 117 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 DLX6P56179 175 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 WT1-ASQ06250 92 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 OR5I1Q13606 314 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 PRR30Q53SZ7 412 aaPredicted RBP16.18■□□□□ 0.18
MSLN-205ENST00000563941 SLC25A33Q9BSK2 321 aa16.18■□□□□ 0.18
MSLN-205ENST00000563941 MAP1BP46821 2468 aaKnown RBP16.17■□□□□ 0.18
MSLN-205ENST00000563941 GCGP01275 180 aa16.17■□□□□ 0.18
MSLN-205ENST00000563941 ERVFC1-1P60608 527 aa16.17■□□□□ 0.18
MSLN-205ENST00000563941 LURAP1LQ8IV03 231 aa16.17■□□□□ 0.18
MSLN-205ENST00000563941 MRPL32Q9BYC8 188 aaKnown RBP16.17■□□□□ 0.18
MSLN-205ENST00000563941 ACACAQ13085 2346 aa16.17■□□□□ 0.18
MSLN-205ENST00000563941 PCNX1Q96RV3 2341 aa16.17■□□□□ 0.18
MSLN-205ENST00000563941 DMXL2Q8TDJ6 3036 aa16.16■□□□□ 0.18
MSLN-205ENST00000563941 PSMB11A5LHX3 300 aa16.16■□□□□ 0.18
MSLN-205ENST00000563941 E7EQL1 145 aa16.16■□□□□ 0.18
MSLN-205ENST00000563941 COL25A1Q9BXS0 654 aaPredicted RBP16.16■□□□□ 0.18
MSLN-205ENST00000563941 ZNF430Q9H8G1 570 aaPredicted RBP16.16■□□□□ 0.18
MSLN-205ENST00000563941 KAAG1Q9UBP8 84 aa16.16■□□□□ 0.18
MSLN-205ENST00000563941 ATMQ13315 3056 aa16.16■□□□□ 0.18
MSLN-205ENST00000563941 SSBP2P81877 361 aaPredicted RBP16.16■□□□□ 0.18
MSLN-205ENST00000563941 RPEL1Q2QD12 228 aa16.16■□□□□ 0.18
MSLN-205ENST00000563941 TMEM155Q4W5P6 130 aa16.16■□□□□ 0.18
MSLN-205ENST00000563941 TGIF2LXQ8IUE1 241 aa16.16■□□□□ 0.18
MSLN-205ENST00000563941 MRPL41Q8IXM3 137 aaKnown RBP16.16■□□□□ 0.18
MSLN-205ENST00000563941 DMRTC2Q8IXT2 367 aaPredicted RBP16.16■□□□□ 0.18
MSLN-205ENST00000563941 NGBQ9NPG2 151 aa16.16■□□□□ 0.18
MSLN-205ENST00000563941 V9GYV3 84 aa16.16■□□□□ 0.18
MSLN-205ENST00000563941 CEP295Q9C0D2 2601 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 A0A1B0GUS0 222 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 CBLN1P23435 193 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 DDTP30046 118 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 ZNF137PP52743 207 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 LGALS4P56470 323 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 MORN5Q5VZ52 161 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 TMEM256Q8N2U0 113 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 SLC25A2Q9BXI2 301 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 FNDC4Q9H6D8 234 aaPredicted RBP16.15■□□□□ 0.18
MSLN-205ENST00000563941 ARFGEF3Q5TH69 2177 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 A0A087X0M5 115 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 A0A1B0GX30 115 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 A0A1W2PRE2 83 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 SUMO1P63165 101 aaKnown RBP16.15■□□□□ 0.18
MSLN-205ENST00000563941 MMD2Q8IY49 270 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 FAM167A-AS1Q96KT0 104 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 RNF2Q99496 336 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 DNAJC4Q9NNZ3 241 aa16.15■□□□□ 0.18
MSLN-205ENST00000563941 TRAV5A0A0B4J249 113 aa16.14■□□□□ 0.17
MSLN-205ENST00000563941 SLC25A17O43808 307 aa16.14■□□□□ 0.17
MSLN-205ENST00000563941 IGHV1-8P0DP01 117 aa16.14■□□□□ 0.17
MSLN-205ENST00000563941 TPSG1Q9NRR2 321 aa16.14■□□□□ 0.17
MSLN-205ENST00000563941 APC2O95996 2303 aa16.14■□□□□ 0.17
MSLN-205ENST00000563941 ZNF705GA8MUZ8 300 aaPredicted RBP16.13■□□□□ 0.17
MSLN-205ENST00000563941 SUB1P53999 127 aaKnown RBP eCLIP16.13■□□□□ 0.17
MSLN-205ENST00000563941 UBE2L3P68036 154 aaKnown RBP16.13■□□□□ 0.17
MSLN-205ENST00000563941 TBR1Q16650 682 aa16.13■□□□□ 0.17
MSLN-205ENST00000563941 VMA21Q3ZAQ7 101 aa16.13■□□□□ 0.17
MSLN-205ENST00000563941 NPIPB3Q92617 1050 aa16.13■□□□□ 0.17
MSLN-205ENST00000563941 C14orf144Q96I85 54 aa16.13■□□□□ 0.17
MSLN-205ENST00000563941 SSUH2Q9Y2M2 353 aa16.13■□□□□ 0.17
MSLN-205ENST00000563941 PKDREJQ9NTG1 2253 aa16.13■□□□□ 0.17
MSLN-205ENST00000563941 MC5RP33032 325 aa16.13■□□□□ 0.17
MSLN-205ENST00000563941 TIGITQ495A1 244 aa16.13■□□□□ 0.17
MSLN-205ENST00000563941 SPACA3Q8IXA5 215 aa16.13■□□□□ 0.17
MSLN-205ENST00000563941 OR1L6Q8NGR2 347 aa16.13■□□□□ 0.17
MSLN-205ENST00000563941 RITA1Q96K30 269 aa16.13■□□□□ 0.17
MSLN-205ENST00000563941 MRPL18Q9H0U6 180 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms