RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 MGAM2Q2M2H8 2515 aa13.18□□□□□ -0.3
RABGGTA-203ENST00000543002 TRBV7-1A0A0A6YYK4 115 aa13.17□□□□□ -0.3
RABGGTA-203ENST00000543002 K7EIM0 57 aa13.17□□□□□ -0.3
RABGGTA-203ENST00000543002 TRBV12-3P01733 135 aa13.17□□□□□ -0.3
RABGGTA-203ENST00000543002 CD33P20138 364 aa13.17□□□□□ -0.3
RABGGTA-203ENST00000543002 HTR2BP41595 481 aa13.17□□□□□ -0.3
RABGGTA-203ENST00000543002 DTD1Q8TEA8 209 aa13.17□□□□□ -0.3
RABGGTA-203ENST00000543002 MISP3Q96FF7 219 aa13.17□□□□□ -0.3
RABGGTA-203ENST00000543002 OR10C1Q96KK4 312 aa13.17□□□□□ -0.3
RABGGTA-203ENST00000543002 CCDC140Q96MF4 163 aa13.17□□□□□ -0.3
RABGGTA-203ENST00000543002 S4R3C0 116 aa13.17□□□□□ -0.3
RABGGTA-203ENST00000543002 MED6O75586 246 aa13.16□□□□□ -0.3
RABGGTA-203ENST00000543002 IGHV3-23P01764 117 aa13.16□□□□□ -0.3
RABGGTA-203ENST00000543002 ZP3P21754 424 aa13.16□□□□□ -0.3
RABGGTA-203ENST00000543002 ID3Q02535 119 aa13.16□□□□□ -0.3
RABGGTA-203ENST00000543002 IAH1Q2TAA2 248 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-203ENST00000543002 C2orf83Q53S99 150 aa13.16□□□□□ -0.3
RABGGTA-203ENST00000543002 C11orf87Q6NUJ2 197 aa13.16□□□□□ -0.3
RABGGTA-203ENST00000543002 SLC24A4Q8NFF2 622 aa13.16□□□□□ -0.3
RABGGTA-203ENST00000543002 OR4D5Q8NGN0 318 aa13.16□□□□□ -0.3
RABGGTA-203ENST00000543002 ZNF502Q8TBZ5 544 aa13.16□□□□□ -0.3
RABGGTA-203ENST00000543002 SCARB1Q8WTV0 552 aa13.16□□□□□ -0.3
RABGGTA-203ENST00000543002 I3L2K1 104 aa13.15□□□□□ -0.3
RABGGTA-203ENST00000543002 CORTO00230 105 aa13.15□□□□□ -0.3
RABGGTA-203ENST00000543002 CCSO14618 274 aa13.15□□□□□ -0.3
RABGGTA-203ENST00000543002 HOXD3P31249 432 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-203ENST00000543002 SLURP1P55000 103 aa13.15□□□□□ -0.3
RABGGTA-203ENST00000543002 CLEC19AQ6UXS0 136 aa13.15□□□□□ -0.3
RABGGTA-203ENST00000543002 ZBTB8BQ8NAP8 495 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-203ENST00000543002 ATP6V0BQ99437 205 aa13.15□□□□□ -0.3
RABGGTA-203ENST00000543002 C21orf62Q9NYP8 219 aa13.15□□□□□ -0.3
RABGGTA-203ENST00000543002 U3KQ87 197 aa13.15□□□□□ -0.3
RABGGTA-203ENST00000543002 IGHV3-21A0A0B4J1V1 117 aa13.14□□□□□ -0.31
RABGGTA-203ENST00000543002 BMPR1BO00238 502 aa13.14□□□□□ -0.31
RABGGTA-203ENST00000543002 SYNGR2O43760 224 aa13.14□□□□□ -0.31
RABGGTA-203ENST00000543002 MT-CO2P00403 227 aa13.14□□□□□ -0.31
RABGGTA-203ENST00000543002 NPY1RP25929 384 aa13.14□□□□□ -0.31
RABGGTA-203ENST00000543002 NKX2-1P43699 371 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-203ENST00000543002 NOXA1Q86UR1 476 aa13.14□□□□□ -0.31
RABGGTA-203ENST00000543002 DCUN1D4Q92564 292 aa13.14□□□□□ -0.31
RABGGTA-203ENST00000543002 DLX4Q92988 240 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-203ENST00000543002 PINX1Q96BK5 328 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-203ENST00000543002 RCC1LQ96I51 464 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-203ENST00000543002 MAGT1Q9H0U3 335 aa13.14□□□□□ -0.31
RABGGTA-203ENST00000543002 C5orf51A6NDU8 294 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 FAM25EA8MYX2 175 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 IFNA10P01566 189 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 CLEC3BP05452 202 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 IAPPP10997 89 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 ATP5IP56385 69 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 RGS21Q2M5E4 152 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 RPEL1Q2QD12 228 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 TMEM170AQ8WVE7 144 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 CIB3Q96Q77 187 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 MCRIP2Q9BUT9 160 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 GSKIPQ9P0R6 139 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 C7orf66A4D0T2 115 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 PPP5D1E7EU14 171 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 F8W735 103 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 OVOL1O14753 267 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 GGCTO75223 188 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 LY86O95711 162 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 FCGR2BP31994 310 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 GPR183P32249 361 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 ARL3P36405 182 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 MFAP4P55083 255 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 POLR2GP62487 172 aaKnown RBP eCLIP13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 KLF5Q13887 457 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 TATDN3Q17R31 274 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 GSG1LQ6UXU4 331 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 RNASEH2CQ8TDP1 164 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 C2orf50Q96LR7 162 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 TXN2Q99757 166 aa13.13□□□□□ -0.31
RABGGTA-203ENST00000543002 NOTCH3Q9UM47 2321 aa13.12□□□□□ -0.31
RABGGTA-203ENST00000543002 WRBO00258 174 aa13.12□□□□□ -0.31
RABGGTA-203ENST00000543002 IGLL1P15814 213 aa13.12□□□□□ -0.31
RABGGTA-203ENST00000543002 FNDC4Q9H6D8 234 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-203ENST00000543002 GAR1Q9NY12 217 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-203ENST00000543002 TGOLN2O43493 480 aa13.11□□□□□ -0.31
RABGGTA-203ENST00000543002 OR2C1O95371 312 aa13.11□□□□□ -0.31
RABGGTA-203ENST00000543002 SCGB1D2O95969 90 aa13.11□□□□□ -0.31
RABGGTA-203ENST00000543002 IGHV3-48P01763 117 aa13.11□□□□□ -0.31
RABGGTA-203ENST00000543002 OPRK1P41145 380 aa13.11□□□□□ -0.31
RABGGTA-203ENST00000543002 RPP30P78346 268 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-203ENST00000543002 Q56UQ5 140 aa13.11□□□□□ -0.31
RABGGTA-203ENST00000543002 SPSB3Q6PJ21 355 aa13.11□□□□□ -0.31
RABGGTA-203ENST00000543002 UBAC2Q8NBM4 344 aa13.11□□□□□ -0.31
RABGGTA-203ENST00000543002 BSCL2Q96G97 398 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-203ENST00000543002 RPS10-NUDT3A0A1W2PQS6 291 aa13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 OR2T8A6NH00 312 aa13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 C15orf62A8K5M9 175 aa13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 GOSR2O14653 212 aa13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 MBPP02686 304 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 SYNJ2BPP57105 145 aa13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 MLANAQ16655 118 aa13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 OXLD1Q5BKU9 147 aa13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 SAMD5Q5TGI4 173 aa13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 ACSM6Q6P461 480 aa13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 GPHB5Q86YW7 130 aa13.1□□□□□ -0.31
RABGGTA-203ENST00000543002 C1QL4Q86Z23 238 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms