RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CT45A7P0DMV0 189 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 RBX1P62877 108 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 OR4S2Q8NH73 311 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 GGTLC1Q9BX51 225 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 C20orf202A1L168 122 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 PRRG2O14669 202 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 NDUFB4O95168 129 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 GNB1P62873 340 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 FOXL1Q12952 345 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 PDLIM3Q53GG5 364 aaPredicted RBP12.06□□□□□ -0.48
DDX55-209ENST00000542286 SAPCD1Q5SSQ6 148 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 ZNF439Q8NDP4 499 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 FAM222BQ8WU58 562 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 BTF3L4Q96K17 158 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 ELOVL5Q9NYP7 299 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 A0A1W2PPV4 95 aa12.05□□□□□ -0.48
DDX55-209ENST00000542286 C15orf61A6NNL5 157 aa12.05□□□□□ -0.48
DDX55-209ENST00000542286 LYNX1G3V0Z9 82 aa12.05□□□□□ -0.48
DDX55-209ENST00000542286 C1QTNF9P0C862 333 aa12.05□□□□□ -0.48
DDX55-209ENST00000542286 LYNX1P0DP58 116 aa12.05□□□□□ -0.48
DDX55-209ENST00000542286 IGFBP2P18065 325 aa12.05□□□□□ -0.48
DDX55-209ENST00000542286 GATA4P43694 442 aa12.05□□□□□ -0.48
DDX55-209ENST00000542286 LINC00310P59036 64 aa12.05□□□□□ -0.48
DDX55-209ENST00000542286 TCTEX1D1Q8N7M0 179 aa12.05□□□□□ -0.48
DDX55-209ENST00000542286 E7EUB6 86 aa12.05□□□□□ -0.48
DDX55-209ENST00000542286 SERF1AO75920 110 aa12.05□□□□□ -0.48
DDX55-209ENST00000542286 TMEM108Q6UXF1 575 aa12.05□□□□□ -0.48
DDX55-209ENST00000542286 C17orf112F2Z3M2 114 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 CD99P14209 185 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 C10orf55Q5SWW7 151 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 OR5AU1Q8NGC0 362 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 MRPL20Q9BYC9 149 aaKnown RBP12.04□□□□□ -0.48
DDX55-209ENST00000542286 SLC25A10Q9UBX3 287 aaPredicted RBP12.04□□□□□ -0.48
DDX55-209ENST00000542286 OR51B2Q9Y5P1 312 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 ZFHX3Q15911 3703 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 CCL25O15444 150 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 APELAP0DMC3 54 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 PTTG1IPP53801 180 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 YPEL3P61236 119 aaPredicted RBP12.04□□□□□ -0.48
DDX55-209ENST00000542286 RPL31P62899 125 aaKnown RBP12.04□□□□□ -0.48
DDX55-209ENST00000542286 ASPHD1Q5U4P2 390 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 STPG4Q8N801 248 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 SLC24A4Q8NFF2 622 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 C22orf15Q8WYQ4 148 aa12.04□□□□□ -0.48
DDX55-209ENST00000542286 C17orf100A8MU93 164 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 NDUFB8O95169 186 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 NPY1RP25929 384 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 COMPP49747 757 aaPredicted RBP12.03□□□□□ -0.48
DDX55-209ENST00000542286 FAM216AQ8WUB2 273 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 LRFN3Q9BTN0 628 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 SAP30LQ9HAJ7 183 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 TRBV20OR9-2A0A075B6H5 130 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 IGHV3-72A0A0B4J1Y9 119 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 CRISP2P16562 243 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 TNFSF4P23510 183 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 SELENOTP62341 195 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 C1orf174Q8IYL3 243 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 SAMD10Q9BYL1 202 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 SLC35D1Q9NTN3 355 aa12.03□□□□□ -0.48
DDX55-209ENST00000542286 SCO2A0A1W2PP80 73 aa12.02□□□□□ -0.48
DDX55-209ENST00000542286 PLAUP00749 431 aa12.02□□□□□ -0.48
DDX55-209ENST00000542286 CBLN1P23435 193 aa12.02□□□□□ -0.48
DDX55-209ENST00000542286 KRTCAP3Q53RY4 240 aa12.02□□□□□ -0.48
DDX55-209ENST00000542286 LEMD1Q68G75 181 aa12.02□□□□□ -0.48
DDX55-209ENST00000542286 LHFPL4Q7Z7J7 247 aa12.02□□□□□ -0.48
DDX55-209ENST00000542286 SPACA3Q8IXA5 215 aa12.02□□□□□ -0.48
DDX55-209ENST00000542286 STPG3Q8N7X2 389 aa12.02□□□□□ -0.48
DDX55-209ENST00000542286 IGFBPL1Q8WX77 278 aa12.02□□□□□ -0.48
DDX55-209ENST00000542286 SCNM1Q9BWG6 230 aa12.02□□□□□ -0.48
DDX55-209ENST00000542286 RPUSD1Q9UJJ7 312 aaKnown RBP12.02□□□□□ -0.48
DDX55-209ENST00000542286 YTHDF2Q9Y5A9 579 aaKnown RBP12.02□□□□□ -0.48
DDX55-209ENST00000542286 VPS13CQ709C8 3753 aa12.02□□□□□ -0.48
DDX55-209ENST00000542286 IGKV1OR2-108A0A075B7D4 117 aa12.02□□□□□ -0.49
DDX55-209ENST00000542286 J3QR06 171 aa12.02□□□□□ -0.49
DDX55-209ENST00000542286 RBFOX2O43251 390 aaKnown RBP eCLIP12.02□□□□□ -0.49
DDX55-209ENST00000542286 SAA1P0DJI8 122 aaPredicted RBP12.02□□□□□ -0.49
DDX55-209ENST00000542286 GRNP28799 593 aaKnown RBP12.02□□□□□ -0.49
DDX55-209ENST00000542286 LGALS4P56470 323 aa12.02□□□□□ -0.49
DDX55-209ENST00000542286 HSPE1P61604 102 aaKnown RBP12.02□□□□□ -0.49
DDX55-209ENST00000542286 TMEM200BQ69YZ2 307 aa12.02□□□□□ -0.49
DDX55-209ENST00000542286 C19orf35Q6ZS72 473 aa12.02□□□□□ -0.49
DDX55-209ENST00000542286 BAGE3Q86Y29 109 aa12.02□□□□□ -0.49
DDX55-209ENST00000542286 BAGE2Q86Y30 109 aa12.02□□□□□ -0.49
DDX55-209ENST00000542286 SFRP2Q96HF1 295 aa12.02□□□□□ -0.49
DDX55-209ENST00000542286 GAL3ST2Q9H3Q3 398 aa12.02□□□□□ -0.49
DDX55-209ENST00000542286 TMEM14BQ9NUH8 114 aa12.02□□□□□ -0.49
DDX55-209ENST00000542286 ESDP10768 282 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 THBS3P49746 956 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 RITA1Q96K30 269 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 CTSZQ9UBR2 303 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 OR5G3P0C626 314 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 AARDQ4LEZ3 155 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 WNK2Q9Y3S1 2297 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 CACNA1BQ00975 2339 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 F2Z2F3 143 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 KRTDAPP60985 99 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 SSBP2P81877 361 aaPredicted RBP12.01□□□□□ -0.49
DDX55-209ENST00000542286 SLC25A48Q6ZT89 311 aaKnown RBP12.01□□□□□ -0.49
DDX55-209ENST00000542286 MIR17HGQ75NE6 70 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 FAM103A1Q9BTL3 118 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms