RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 IGHV4OR15-8A0A075B7B6 117 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 A0A087WW49 117 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 RPS10-NUDT3A0A1W2PQS6 291 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 ANKRD34BA5PLL1 514 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 GGCTO75223 188 aaKnown RBP14.47□□□□□ -0.09
VPS33A-205ENST00000541169 SCGB2A1O75556 95 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 FCGR2BP31994 310 aaPredicted RBP14.47□□□□□ -0.09
VPS33A-205ENST00000541169 INSL3P51460 131 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 RPEL1Q2QD12 228 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 SPSB3Q6PJ21 355 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 SLC24A4Q8NFF2 622 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 OR52B4Q8NGK2 314 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 ZNF502Q8TBZ5 544 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 C21orf62Q9NYP8 219 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 DMRT1Q9Y5R6 373 aa14.47□□□□□ -0.09
VPS33A-205ENST00000541169 SYNGR2O43760 224 aa14.46□□□□□ -0.09
VPS33A-205ENST00000541169 ADAP1O75689 374 aa14.46□□□□□ -0.09
VPS33A-205ENST00000541169 RNASE2P10153 161 aaKnown RBP14.46□□□□□ -0.09
VPS33A-205ENST00000541169 HOXD3P31249 432 aaPredicted RBP14.46□□□□□ -0.09
VPS33A-205ENST00000541169 SPINK9Q5DT21 86 aa14.46□□□□□ -0.09
VPS33A-205ENST00000541169 ETFRF1Q6IPR1 90 aa14.46□□□□□ -0.09
VPS33A-205ENST00000541169 SCARB1Q8WTV0 552 aa14.46□□□□□ -0.09
VPS33A-205ENST00000541169 MISP3Q96FF7 219 aa14.46□□□□□ -0.09
VPS33A-205ENST00000541169 BSCL2Q96G97 398 aaPredicted RBP14.46□□□□□ -0.09
VPS33A-205ENST00000541169 DUX3Q96PT4 197 aa14.46□□□□□ -0.09
VPS33A-205ENST00000541169 SEC22CQ9BRL7 303 aa14.46□□□□□ -0.09
VPS33A-205ENST00000541169 RBKSQ9H477 322 aa14.46□□□□□ -0.09
VPS33A-205ENST00000541169 OVOL1O14753 267 aa14.45□□□□□ -0.1
VPS33A-205ENST00000541169 IFNA10P01566 189 aa14.45□□□□□ -0.1
VPS33A-205ENST00000541169 ARL3P36405 182 aa14.45□□□□□ -0.1
VPS33A-205ENST00000541169 NKX2-1P43699 371 aaPredicted RBP14.45□□□□□ -0.1
VPS33A-205ENST00000541169 MFAP2P55001 183 aa14.45□□□□□ -0.1
VPS33A-205ENST00000541169 MFAP4P55083 255 aa14.45□□□□□ -0.1
VPS33A-205ENST00000541169 ID3Q02535 119 aa14.45□□□□□ -0.1
VPS33A-205ENST00000541169 IAH1Q2TAA2 248 aaPredicted RBP14.45□□□□□ -0.1
VPS33A-205ENST00000541169 C19orf35Q6ZS72 473 aa14.45□□□□□ -0.1
VPS33A-205ENST00000541169 ELOVL1Q9BW60 279 aa14.45□□□□□ -0.1
VPS33A-205ENST00000541169 I3L2K1 104 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 K7EIM0 57 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 WRBO00258 174 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 CLEC3BP05452 202 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 NPY1RP25929 384 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 NPBWR1P48145 328 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 KLF5Q13887 457 aaPredicted RBP14.44□□□□□ -0.1
VPS33A-205ENST00000541169 CLEC19AQ6UXS0 136 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 GPHB5Q86YW7 130 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 C1QL4Q86Z23 238 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 UXS1Q8NBZ7 420 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 OR4D5Q8NGN0 318 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 CCDC140Q96MF4 163 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 PEMTQ9UBM1 199 aa14.44□□□□□ -0.1
VPS33A-205ENST00000541169 VWFP04275 2813 aa14.43□□□□□ -0.1
VPS33A-205ENST00000541169 MFSD2BA6NFX1 497 aa14.43□□□□□ -0.1
VPS33A-205ENST00000541169 BMPR1BO00238 502 aa14.43□□□□□ -0.1
VPS33A-205ENST00000541169 MT-CO2P00403 227 aa14.43□□□□□ -0.1
VPS33A-205ENST00000541169 SLC25A4P12235 298 aa14.43□□□□□ -0.1
VPS33A-205ENST00000541169 RAB11AP62491 216 aa14.43□□□□□ -0.1
VPS33A-205ENST00000541169 DEFA5Q01523 94 aa14.43□□□□□ -0.1
VPS33A-205ENST00000541169 RGS21Q2M5E4 152 aa14.43□□□□□ -0.1
VPS33A-205ENST00000541169 FAM106AQ4KMX7 169 aa14.43□□□□□ -0.1
VPS33A-205ENST00000541169 C9orf66Q5T8R8 295 aa14.43□□□□□ -0.1
VPS33A-205ENST00000541169 GSG1LQ6UXU4 331 aa14.43□□□□□ -0.1
VPS33A-205ENST00000541169 DCUN1D4Q92564 292 aa14.43□□□□□ -0.1
VPS33A-205ENST00000541169 DLX4Q92988 240 aaPredicted RBP14.43□□□□□ -0.1
VPS33A-205ENST00000541169 PKD1L1Q8TDX9 2849 aa14.42□□□□□ -0.1
VPS33A-205ENST00000541169 DNHD1Q96M86 4753 aa14.42□□□□□ -0.1
VPS33A-205ENST00000541169 C5orf51A6NDU8 294 aa14.42□□□□□ -0.1
VPS33A-205ENST00000541169 LGALS9O00182 355 aa14.42□□□□□ -0.1
VPS33A-205ENST00000541169 WIPF1O43516 503 aa14.42□□□□□ -0.1
VPS33A-205ENST00000541169 OPRK1P41145 380 aa14.42□□□□□ -0.1
VPS33A-205ENST00000541169 TAS2R30P59541 319 aa14.42□□□□□ -0.1
VPS33A-205ENST00000541169 ZBTB8BQ8NAP8 495 aaPredicted RBP14.42□□□□□ -0.1
VPS33A-205ENST00000541169 PINX1Q96BK5 328 aaKnown RBP14.42□□□□□ -0.1
VPS33A-205ENST00000541169 C2orf50Q96LR7 162 aa14.42□□□□□ -0.1
VPS33A-205ENST00000541169 RAB40CQ96S21 281 aa14.42□□□□□ -0.1
VPS33A-205ENST00000541169 NUPL2O15504 423 aaKnown RBP14.41□□□□□ -0.1
VPS33A-205ENST00000541169 TGOLN2O43493 480 aa14.41□□□□□ -0.1
VPS33A-205ENST00000541169 NXPH3O95157 252 aa14.41□□□□□ -0.1
VPS33A-205ENST00000541169 SLURP1P55000 103 aa14.41□□□□□ -0.1
VPS33A-205ENST00000541169 CYCSP99999 105 aaKnown RBP14.41□□□□□ -0.1
VPS33A-205ENST00000541169 RELQ04864 619 aaPredicted RBP14.41□□□□□ -0.1
VPS33A-205ENST00000541169 Q56UQ5 140 aa14.41□□□□□ -0.1
VPS33A-205ENST00000541169 OR10C1Q96KK4 312 aa14.41□□□□□ -0.1
VPS33A-205ENST00000541169 GSKIPQ9P0R6 139 aa14.41□□□□□ -0.1
VPS33A-205ENST00000541169 MGAM2Q2M2H8 2515 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 TRAV30A0A087WSZ9 112 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 MPTX1A8MV57 137 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 FAM25EA8MYX2 175 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 SEC14L6B5MCN3 397 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 GNG7O60262 68 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 SCAF4O95104 1147 aaKnown RBP14.4□□□□□ -0.1
VPS33A-205ENST00000541169 TRBV12-3P01733 135 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 GPR183P32249 361 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 SAMD5Q5TGI4 173 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 ACSM6Q6P461 480 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 OR9G4Q8NGQ1 327 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 OR4X1Q8NH49 305 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 CACNG8Q8WXS5 425 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 OR4C12Q96R67 309 aa14.4□□□□□ -0.1
VPS33A-205ENST00000541169 SIGLEC8Q9NYZ4 499 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms