RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 MT-CO2P00403 227 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 PYYP10082 97 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 FXYD3Q14802 87 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 LEMD1Q68G75 181 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 PRR27Q6MZM9 219 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 CDPF1Q6NVV7 123 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 OR52E5Q8NH55 327 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 WASHC3Q9Y3C0 194 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 HRNRQ86YZ3 2850 aaPredicted RBP12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 B4DEV8 164 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 SIAH2O43255 324 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 RAB4BP61018 213 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 VMA21Q3ZAQ7 101 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 SGMS2Q8NHU3 365 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 MSRB2Q9Y3D2 182 aa12.91□□□□□ -0.34
ATP2C1-224ENST00000533801 B9A039 149 aa12.9□□□□□ -0.34
ATP2C1-224ENST00000533801 TMEM250H0YL14 139 aa12.9□□□□□ -0.34
ATP2C1-224ENST00000533801 MPDU1O75352 247 aa12.9□□□□□ -0.34
ATP2C1-224ENST00000533801 AREGP15514 252 aa12.9□□□□□ -0.34
ATP2C1-224ENST00000533801 WT1-ASQ06250 92 aa12.9□□□□□ -0.34
ATP2C1-224ENST00000533801 ZNF672Q499Z4 452 aaPredicted RBP12.9□□□□□ -0.34
ATP2C1-224ENST00000533801 OR1B1Q8NGR6 318 aa12.9□□□□□ -0.34
ATP2C1-224ENST00000533801 C1orf159Q96HA4 380 aa12.9□□□□□ -0.34
ATP2C1-224ENST00000533801 COX7A2P2O60397 106 aa12.9□□□□□ -0.34
ATP2C1-224ENST00000533801 SOD3P08294 240 aa12.9□□□□□ -0.34
ATP2C1-224ENST00000533801 MORN5Q5VZ52 161 aa12.9□□□□□ -0.34
ATP2C1-224ENST00000533801 UBE2L3P68036 154 aaKnown RBP12.9□□□□□ -0.35
ATP2C1-224ENST00000533801 PAX5Q02548 391 aa12.9□□□□□ -0.35
ATP2C1-224ENST00000533801 MEF2CQ06413 473 aaPredicted RBP12.9□□□□□ -0.35
ATP2C1-224ENST00000533801 VWC2Q2TAL6 325 aa12.9□□□□□ -0.35
ATP2C1-224ENST00000533801 C3orf36Q3SXR2 165 aa12.9□□□□□ -0.35
ATP2C1-224ENST00000533801 OR2T10Q8NGZ9 312 aa12.9□□□□□ -0.35
ATP2C1-224ENST00000533801 OR4X1Q8NH49 305 aa12.9□□□□□ -0.35
ATP2C1-224ENST00000533801 STAG3L2P0CL84 134 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 STAG3L3P0CL85 134 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 RNASE2P10153 161 aaKnown RBP12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 SP5Q6BEB4 398 aaPredicted RBP12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 KDF1Q8NAX2 398 aaPredicted RBP12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 PARD6GQ9BYG4 376 aaPredicted RBP12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 GAR1Q9NY12 217 aaKnown RBP12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 MIOXQ9UGB7 285 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 A0A1B0GUS0 222 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 UBE2CO00762 179 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 PPOXP50336 477 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 ERVFC1-1P60608 527 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 CENPVQ7Z7K6 275 aaPredicted RBP12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 OCC1Q8TAD7 63 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 MALSU1Q96EH3 234 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 LINC00479Q96M42 142 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 TMEM133Q9H2Q1 129 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 METTL1Q9UBP6 276 aaKnown RBP12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 ZNF835Q9Y2P0 537 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 TRAV34A0A0B4J273 112 aa12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 OSR1Q8TAX0 266 aaPredicted RBP12.89□□□□□ -0.35
ATP2C1-224ENST00000533801 TRBV20OR9-2A0A075B6H5 130 aa12.88□□□□□ -0.35
ATP2C1-224ENST00000533801 ZNF833PQ6ZTB9 187 aa12.88□□□□□ -0.35
ATP2C1-224ENST00000533801 LINC01551Q86U37 167 aa12.88□□□□□ -0.35
ATP2C1-224ENST00000533801 OR5AU1Q8NGC0 362 aa12.88□□□□□ -0.35
ATP2C1-224ENST00000533801 FKBP11Q9NYL4 201 aa12.88□□□□□ -0.35
ATP2C1-224ENST00000533801 MRPL36Q9P0J6 103 aaKnown RBP12.88□□□□□ -0.35
ATP2C1-224ENST00000533801 IGHV2-26A0A0B4J1V2 119 aa12.88□□□□□ -0.35
ATP2C1-224ENST00000533801 UBTD1Q9HAC8 227 aa12.88□□□□□ -0.35
ATP2C1-224ENST00000533801 XKRY2A2RUG3 117 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 PRSS46E5RG02 174 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 PDE6DO43924 150 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 MMDQ15546 238 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 PQLC2Q6ZP29 291 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 CORO2AQ92828 525 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 IMMP2LQ96T52 175 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 KCNIP2Q9NS61 270 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 IL3RAP26951 378 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 CA7P43166 264 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 SSTP61278 116 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 RANP62826 216 aaKnown RBP12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 KLRB1Q12918 225 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 SSX2Q16385 188 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 OR5B3Q8NH48 314 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 TMEM186Q96B77 213 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 FNDC4Q9H6D8 234 aaPredicted RBP12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 FAM90A9PA6NNJ1 464 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 USF1P22415 310 aaPredicted RBP12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 KCNIP4Q6PIL6 250 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 JKAMPQ9P055 326 aa12.87□□□□□ -0.35
ATP2C1-224ENST00000533801 A0A1W2PPI3 338 aa12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 CXorf65A6NEN9 183 aa12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 HLA-DRB5Q30154 266 aa12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 TMEM155Q4W5P6 130 aa12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 LSM4Q9Y4Z0 139 aaKnown RBP12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 LRRK2Q5S007 2527 aa12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 ZNF705GA8MUZ8 300 aaPredicted RBP12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 IGHV2-5P01817 119 aa12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 RBP4P02753 201 aa12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 CD69Q07108 199 aa12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 KLF17Q5JT82 389 aaPredicted RBP12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 RUSC1-AS1Q66K80 236 aa12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 TMEM144Q7Z5S9 345 aa12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 YPEL4Q96NS1 127 aa12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 SLC25A33Q9BSK2 321 aa12.86□□□□□ -0.35
ATP2C1-224ENST00000533801 FLNCQ14315 2725 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms