RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 HAND1O96004 215 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 HLA-DRB1P01911 266 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 SRP19P09132 144 aaKnown RBP1.3□□□□□ -2.2
CD44-234ENST00000531873 ZNF705DP0CH99 300 aaPredicted RBP1.3□□□□□ -2.2
CD44-234ENST00000531873 FAM236CP0DP71 79 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 S100A7P31151 101 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 CA5AP35218 305 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 CAPZBP47756 277 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 RAB13P51153 203 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 PSME3P61289 254 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 REEP5Q00765 189 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 EDDM3AQ14507 147 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 KCNJ8Q15842 424 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 TPRXLQ17RH7 258 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 KRTAP21-3Q3LHN1 58 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 GLT8D1Q68CQ7 371 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 LHFPL1Q86WI0 220 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 TBC1D19Q8N5T2 526 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 OR51T1Q8NGJ9 327 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 OR4X1Q8NH49 305 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 DCUN1D1Q96GG9 259 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 KLF6Q99612 283 aaPredicted RBP1.3□□□□□ -2.2
CD44-234ENST00000531873 OR8D2Q9GZM6 311 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 DCSTAMPQ9H295 470 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 RSL24D1Q9UHA3 163 aaKnown RBP1.3□□□□□ -2.2
CD44-234ENST00000531873 FBXO5Q9UKT4 447 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 NKTRP30414 1462 aaKnown RBP1.3□□□□□ -2.2
CD44-234ENST00000531873 GOLGA3Q08378 1498 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 ZMYM4Q5VZL5 1548 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 GLI3P10071 1580 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 HECW1Q76N89 1606 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 MROH1Q8NDA8 1641 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 MYO3AQ8NEV4 1616 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 KALRNO60229 2985 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 ABCA2Q9BZC7 2435 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 PIEZO2Q9H5I5 2752 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 FBN1P35555 2871 aaKnown RBP1.29□□□□□ -2.2
CD44-234ENST00000531873 A0A0J9YW62 118 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 C2orf74A8MZ97 194 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 FNDC10F2Z333 226 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 H3BT86 120 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 PSMD12O00232 456 aaPredicted RBP1.29□□□□□ -2.2
CD44-234ENST00000531873 HSD11B1P28845 292 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 RPL28P46779 137 aaKnown RBP1.29□□□□□ -2.2
CD44-234ENST00000531873 CSN1S1P47710 185 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 DEFA1P59665 94 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 SNRPD2P62316 118 aaKnown RBP1.29□□□□□ -2.2
CD44-234ENST00000531873 AKR1C1Q04828 323 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 GRK1Q15835 563 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 ZNF791Q3KP31 576 aaPredicted RBP1.29□□□□□ -2.2
CD44-234ENST00000531873 TMEM97Q5BJF2 176 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 Q6ZS52 159 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 OR5B17Q8NGF7 314 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 DGCR14Q96DF8 476 aaKnown RBP1.29□□□□□ -2.2
CD44-234ENST00000531873 IMMP2LQ96T52 175 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 WDR61Q9GZS3 305 aaKnown RBP1.29□□□□□ -2.2
CD44-234ENST00000531873 RNASE7Q9H1E1 156 aaKnown RBP1.29□□□□□ -2.2
CD44-234ENST00000531873 TLNRD1Q9H1K6 362 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 CXCL16Q9H2A7 254 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 VCX3BQ9H321 246 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 PSTPIP2Q9H939 334 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 EFCAB1Q9HAE3 211 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 XAGE1AQ9HD64 81 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 TP73-AS1Q9UF72 201 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 HHLA3Q9XRX5 114 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 FUT9Q9Y231 359 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 EYSQ5T1H1 3165 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 CCDC144AA2RUR9 1427 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 FYCO1Q9BQS8 1478 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 IQGAP1P46940 1657 aa1.29□□□□□ -2.2
CD44-234ENST00000531873 ARHGEF28Q8N1W1 1705 aaKnown RBP1.29□□□□□ -2.2
CD44-234ENST00000531873 SDK1Q7Z5N4 2213 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 CFAP46Q8IYW2 2715 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 TEX15Q9BXT5 2789 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 TRAV26-2A0A0B4J265 109 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 RFPL4AA6NLU0 287 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 RFPL4AL1F8VTS6 287 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 PRM2P04554 102 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 LGALS1P09382 135 aaKnown RBP1.28□□□□□ -2.2
CD44-234ENST00000531873 UCHL1P09936 223 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 P0DMU3 169 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 FAM231AP0DMU4 169 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 FAM231CP0DMU5 169 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 DEFA4P12838 97 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 HLA-DMBP28068 263 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 EVX1P49640 407 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 RAB14P61106 215 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 CCL20P78556 96 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 ZNF90Q03938 601 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 CDK10Q15131 360 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 KISS1Q15726 138 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 IAH1Q2TAA2 248 aaPredicted RBP1.28□□□□□ -2.2
CD44-234ENST00000531873 AKIRIN2Q53H80 203 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 PABPC1L2AQ5JQF8 200 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 Q6ZS49 121 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 S100A7AQ86SG5 101 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 Q8NDZ9 215 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 OR8B12Q8NGG6 310 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 OR5J2Q8NH18 312 aa1.28□□□□□ -2.2
CD44-234ENST00000531873 NIPSNAP1Q9BPW8 284 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms