RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 OR1P1Q8NH06 330 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SRSF12Q8WXF0 261 aaKnown RBP4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RAB24Q969Q5 203 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PERPQ96FX8 193 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RARRES2Q99969 163 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PBDC1Q9BVG4 233 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ACTR3CQ9C0K3 210 aaPredicted RBP4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FNDC4Q9H6D8 234 aaPredicted RBP4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TMEM231Q9H6L2 316 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SLC39A9Q9NUM3 307 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 BEX4Q9NWD9 120 aaPredicted RBP4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SLC45A2Q9UMX9 530 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PXMP4Q9Y6I8 212 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CSMD1Q96PZ7 3565 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CSMD2Q7Z408 3487 aa4.32□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TENM4Q6N022 2769 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 NBPF19A0A087WUL8 3843 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 IGKV1D-37A0A075B6S9 117 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 IGHV1-69DA0A0B4J2H0 117 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MAP1LC3B2A6NCE7 125 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 F8W036 122 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CYB5BO43169 146 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SCO1O75880 301 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 IGHV1-69P01742 117 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 APOC3P02656 99 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 HSPB1P04792 205 aaKnown RBP4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MSMBP08118 114 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SRP19P09132 144 aaKnown RBP4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SFTA3P0C7M3 94 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FAM106CPP0CH98 169 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CTRB1P17538 263 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CD24P25063 80 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 COL8A1P27658 744 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 B2MP61769 119 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 HNF4GQ14541 408 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ICAM4Q14773 271 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FXYD3Q14802 87 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MMDQ15546 238 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 GUCA2BQ16661 112 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CLEC12BQ2HXU8 276 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 KHDC3LQ587J8 217 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 GCSAMLQ5JQS6 135 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FAM120AOSQ5T036 256 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MIC13Q5XKP0 118 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CTRB2Q6GPI1 263 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ATRAIDQ6UW56 229 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 LCN15Q6UWW0 184 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ZNF562Q6V9R5 426 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SLC16A13Q7RTY0 426 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 LRRC75A-AS1Q8N1F1 130 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SVBPQ8N300 66 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 STPG3Q8N7X2 389 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 Q8N9W7 124 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 THAP8Q8NA92 274 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TMEM116Q8NCL8 245 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 OR2T6Q8NHC8 308 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 NARS2Q96I59 477 aaKnown RBP4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PSMG3-AS1Q96PY0 264 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MAP1LC3BQ9GZQ8 125 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 EIF5A2Q9GZV4 153 aaKnown RBP4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 SLC35B3Q9H1N7 401 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 MEGF9Q9H1U4 602 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 KCNIP2Q9NS61 270 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 DMRT1Q9Y5R6 373 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 F11RQ9Y624 299 aaKnown RBP4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TEX15Q9BXT5 2789 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TLN2Q9Y4G6 2542 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ZFHX3Q15911 3703 aa4.31□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CCDC168Q8NDH2 2452 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TRAV20A0A0B4J274 112 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 LOC102723971A0A1B0GUV8 181 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 A0A1B0GV50 99 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PSMB11A5LHX3 300 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 B4DSR2 109 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 J3QKU1 62 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CORTO00230 105 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CNIH1O95406 144 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 REG1AP05451 166 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 STAG3L2P0CL84 134 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 STAG3L3P0CL85 134 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 BCL2P10415 239 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 EGR2P11161 476 aaPredicted RBP4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TMEM11P17152 192 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 GATA3P23771 443 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 BRS3P32247 399 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 TAGLN2P37802 199 aaKnown RBP4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CDC34P49427 236 aaPredicted RBP4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FGF8P55075 233 aaPredicted RBP4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 GNB1P62873 340 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 CX3CL1P78423 397 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 DEFA5Q01523 94 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 LOXL1Q08397 574 aaPredicted RBP4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 HES1Q14469 280 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 PLGLAQ15195 96 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 HAGHQ16775 308 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 KLK9Q2XQG4 91 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 DEFB113Q30KQ7 82 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RUSC1-AS1Q66K80 236 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ETFRF1Q6IPR1 90 aa4.3□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FAM122CQ6P4D5 195 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms