RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 TEX38Q6PEX7 206 aa12.01□□□□□ -0.49
NUP54-217ENST00000514987 C11orf42Q8N5U0 333 aa12.01□□□□□ -0.49
NUP54-217ENST00000514987 THAP8Q8NA92 274 aa12.01□□□□□ -0.49
NUP54-217ENST00000514987 BEND2Q8NDZ0 799 aa12.01□□□□□ -0.49
NUP54-217ENST00000514987 OR10D4PQ8NGN7 298 aa12.01□□□□□ -0.49
NUP54-217ENST00000514987 OR1P1Q8NH06 330 aa12.01□□□□□ -0.49
NUP54-217ENST00000514987 SLC25A33Q9BSK2 321 aa12.01□□□□□ -0.49
NUP54-217ENST00000514987 DNAJC4Q9NNZ3 241 aa12.01□□□□□ -0.49
NUP54-217ENST00000514987 MIOXQ9UGB7 285 aa12.01□□□□□ -0.49
NUP54-217ENST00000514987 RP1L1Q8IWN7 2480 aaPredicted RBP12□□□□□ -0.49
NUP54-217ENST00000514987 TRBV20OR9-2A0A075B6H5 130 aa12□□□□□ -0.49
NUP54-217ENST00000514987 OR7C2O60412 319 aa12□□□□□ -0.49
NUP54-217ENST00000514987 IGHV2-70P01814 119 aa12□□□□□ -0.49
NUP54-217ENST00000514987 BPIFB3P59826 476 aa12□□□□□ -0.49
NUP54-217ENST00000514987 RPL19P84098 196 aaKnown RBP12□□□□□ -0.49
NUP54-217ENST00000514987 WT1-ASQ06250 92 aa12□□□□□ -0.49
NUP54-217ENST00000514987 ZNF672Q499Z4 452 aaPredicted RBP12□□□□□ -0.49
NUP54-217ENST00000514987 C8orf46Q8TAG6 207 aa12□□□□□ -0.49
NUP54-217ENST00000514987 CLEC7AQ9BXN2 247 aa12□□□□□ -0.49
NUP54-217ENST00000514987 ACACAQ13085 2346 aa12□□□□□ -0.49
NUP54-217ENST00000514987 MUC6Q6W4X9 2439 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 IGHV2-26A0A0B4J1V2 119 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 A0A0U1RQK1 487 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 TCRBV4S1A1TA0A5B7 111 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 ZNF320A2RRD8 509 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 HELTA6NFD8 242 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 CGB1A6NKQ9 187 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 CORTO00230 105 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 ENSAO43768 121 aaKnown RBP11.99□□□□□ -0.49
NUP54-217ENST00000514987 SLC25A17O43808 307 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 IGLV1-47P01700 117 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 COMPP49747 757 aaPredicted RBP11.99□□□□□ -0.49
NUP54-217ENST00000514987 PDLIM4P50479 330 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 DIAPH2-AS1Q14236 149 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 PVRIGQ6DKI7 326 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 MOB3BQ86TA1 216 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 ZNF114Q8NC26 417 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 SGMS2Q8NHU3 365 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 C22orf15Q8WYQ4 148 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 FAM122AQ96E09 287 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 EAF1Q96JC9 268 aaPredicted RBP11.99□□□□□ -0.49
NUP54-217ENST00000514987 RNF5Q99942 180 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 IL36BQ9NZH7 164 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 DMRT1Q9Y5R6 373 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 AKAP13Q12802 2813 aa11.99□□□□□ -0.49
NUP54-217ENST00000514987 PSMB11A5LHX3 300 aa11.98□□□□□ -0.49
NUP54-217ENST00000514987 FAM90A27PA6NNH2 459 aa11.98□□□□□ -0.49
NUP54-217ENST00000514987 CCL21O00585 134 aa11.98□□□□□ -0.49
NUP54-217ENST00000514987 COX7A2P2O60397 106 aa11.98□□□□□ -0.49
NUP54-217ENST00000514987 PRSS8Q16651 343 aa11.98□□□□□ -0.49
NUP54-217ENST00000514987 MLANAQ16655 118 aa11.98□□□□□ -0.49
NUP54-217ENST00000514987 PYY3Q5JQD4 70 aa11.98□□□□□ -0.49
NUP54-217ENST00000514987 GFI1BQ5VTD9 330 aa11.98□□□□□ -0.49
NUP54-217ENST00000514987 ZNF841Q6ZN19 808 aa11.98□□□□□ -0.49
NUP54-217ENST00000514987 OR2T6Q8NHC8 308 aa11.98□□□□□ -0.49
NUP54-217ENST00000514987 LINC01560Q8TB33 94 aa11.98□□□□□ -0.49
NUP54-217ENST00000514987 INSIG2Q9Y5U4 225 aa11.98□□□□□ -0.49
NUP54-217ENST00000514987 BUB1B-PAK6H3BSN5 160 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 PLAUP00749 431 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 OR10J4P0C629 311 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 FABP4P15090 132 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 RPL27AP46776 148 aaKnown RBP11.97□□□□□ -0.49
NUP54-217ENST00000514987 GNG4P50150 75 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 PAX2Q02962 417 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 C10orf113Q5VZT2 155 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 ANKRD11Q6UB99 2663 aaPredicted RBP11.97□□□□□ -0.49
NUP54-217ENST00000514987 OR8B3Q8NGG8 313 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 ZNF503Q96F45 646 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 OR8B2Q96RD0 313 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 HIST1H2BLQ99880 126 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 RAB1BQ9H0U4 201 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 TRAPPC1Q9Y5R8 145 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 ZFHX4Q86UP3 3567 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 APC2O95996 2303 aa11.97□□□□□ -0.49
NUP54-217ENST00000514987 A0A1W2PPI3 338 aa11.96□□□□□ -0.49
NUP54-217ENST00000514987 PGPEP1LA6NFU8 196 aa11.96□□□□□ -0.49
NUP54-217ENST00000514987 E7EUB6 86 aa11.96□□□□□ -0.49
NUP54-217ENST00000514987 CRYGBP07316 175 aa11.96□□□□□ -0.49
NUP54-217ENST00000514987 COL8A2P25067 703 aa11.96□□□□□ -0.49
NUP54-217ENST00000514987 RPL15P61313 204 aaKnown RBP11.96□□□□□ -0.49
NUP54-217ENST00000514987 CLEC12BQ2HXU8 276 aa11.96□□□□□ -0.49
NUP54-217ENST00000514987 TIGITQ495A1 244 aa11.96□□□□□ -0.49
NUP54-217ENST00000514987 STXBP6Q8NFX7 210 aa11.96□□□□□ -0.49
NUP54-217ENST00000514987 TMEM37Q8WXS4 190 aa11.96□□□□□ -0.49
NUP54-217ENST00000514987 NPIPB3Q92617 1050 aa11.96□□□□□ -0.49
NUP54-217ENST00000514987 PACRGQ96M98 296 aaPredicted RBP11.96□□□□□ -0.49
NUP54-217ENST00000514987 AURKAIP1Q9NWT8 199 aaPredicted RBP11.96□□□□□ -0.49
NUP54-217ENST00000514987 ARFGEF3Q5TH69 2177 aa11.96□□□□□ -0.49
NUP54-217ENST00000514987 TNCP24821 2201 aa11.96□□□□□ -0.5
NUP54-217ENST00000514987 PPIAL4CA0A0B4J2A2 164 aa11.96□□□□□ -0.5
NUP54-217ENST00000514987 IGHV1-3A0A0C4DH29 117 aa11.96□□□□□ -0.5
NUP54-217ENST00000514987 CRYGCP07315 174 aa11.96□□□□□ -0.5
NUP54-217ENST00000514987 PPIAL4GP0DN37 164 aa11.96□□□□□ -0.5
NUP54-217ENST00000514987 GATA2P23769 480 aaPredicted RBP11.96□□□□□ -0.5
NUP54-217ENST00000514987 CNN1P51911 297 aaKnown RBP11.96□□□□□ -0.5
NUP54-217ENST00000514987 YPEL3P61236 119 aaPredicted RBP11.96□□□□□ -0.5
NUP54-217ENST00000514987 PDZD11Q5EBL8 140 aa11.96□□□□□ -0.5
NUP54-217ENST00000514987 FAM167A-AS1Q96KT0 104 aa11.96□□□□□ -0.5
NUP54-217ENST00000514987 SRSF8Q9BRL6 282 aaKnown RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms