RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 SPINK9Q5DT21 86 aa13.18□□□□□ -0.3
CDK5RAP1-214ENST00000488723 C19orf35Q6ZS72 473 aa13.18□□□□□ -0.3
CDK5RAP1-214ENST00000488723 OR4D5Q8NGN0 318 aa13.18□□□□□ -0.3
CDK5RAP1-214ENST00000488723 DTD1Q8TEA8 209 aa13.18□□□□□ -0.3
CDK5RAP1-214ENST00000488723 RBKSQ9H477 322 aa13.18□□□□□ -0.3
CDK5RAP1-214ENST00000488723 GAR1Q9NY12 217 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP1-214ENST00000488723 SYNGR2O43760 224 aa13.17□□□□□ -0.3
CDK5RAP1-214ENST00000488723 FCGR2BP31994 310 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP1-214ENST00000488723 NKX2-1P43699 371 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP1-214ENST00000488723 EXOSC2Q13868 293 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP1-214ENST00000488723 IAH1Q2TAA2 248 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP1-214ENST00000488723 LINC00482Q8N8I6 264 aa13.17□□□□□ -0.3
CDK5RAP1-214ENST00000488723 UXS1Q8NBZ7 420 aa13.17□□□□□ -0.3
CDK5RAP1-214ENST00000488723 OR5B12Q96R08 314 aa13.17□□□□□ -0.3
CDK5RAP1-214ENST00000488723 TXN2Q99757 166 aa13.17□□□□□ -0.3
CDK5RAP1-214ENST00000488723 NOTCH1P46531 2555 aa13.17□□□□□ -0.3
CDK5RAP1-214ENST00000488723 C7orf66A4D0T2 115 aa13.16□□□□□ -0.3
CDK5RAP1-214ENST00000488723 MPTX1A8MV57 137 aa13.16□□□□□ -0.3
CDK5RAP1-214ENST00000488723 SPNP16150 400 aa13.16□□□□□ -0.3
CDK5RAP1-214ENST00000488723 RPP30P78346 268 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP1-214ENST00000488723 DEFB136Q30KP8 78 aa13.16□□□□□ -0.3
CDK5RAP1-214ENST00000488723 ZBTB8BQ8NAP8 495 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP1-214ENST00000488723 SLC24A4Q8NFF2 622 aa13.16□□□□□ -0.3
CDK5RAP1-214ENST00000488723 ZNF502Q8TBZ5 544 aa13.16□□□□□ -0.3
CDK5RAP1-214ENST00000488723 RNASEH2CQ8TDP1 164 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP1-214ENST00000488723 SCARB1Q8WTV0 552 aa13.16□□□□□ -0.3
CDK5RAP1-214ENST00000488723 OR10C1Q96KK4 312 aa13.16□□□□□ -0.3
CDK5RAP1-214ENST00000488723 C2orf50Q96LR7 162 aa13.16□□□□□ -0.3
CDK5RAP1-214ENST00000488723 I3L2K1 104 aa13.15□□□□□ -0.3
CDK5RAP1-214ENST00000488723 K7EIM0 57 aa13.15□□□□□ -0.3
CDK5RAP1-214ENST00000488723 GSG1LQ6UXU4 331 aa13.15□□□□□ -0.3
CDK5RAP1-214ENST00000488723 MCRIP2Q9BUT9 160 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP1-214ENST00000488723 C21orf62Q9NYP8 219 aa13.15□□□□□ -0.3
CDK5RAP1-214ENST00000488723 IGHV4OR15-8A0A075B7B6 117 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 A0A087WW49 117 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 C5orf51A6NDU8 294 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 IFNA10P01566 189 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 CLEC3BP05452 202 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 CD33P20138 364 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 NPY1RP25929 384 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 OXA1LQ15070 435 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 TATDN3Q17R31 274 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 SPSB3Q6PJ21 355 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 MISP3Q96FF7 219 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 RCC1LQ96I51 464 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 CCDC140Q96MF4 163 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 CMYA5Q8N3K9 4069 aa13.14□□□□□ -0.31
CDK5RAP1-214ENST00000488723 RPS10-NUDT3A0A1W2PQS6 291 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 ANKRD34BA5PLL1 514 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 MFSD2BA6NFX1 497 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 WRBO00258 174 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 GGCTO75223 188 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 NXPH3O95157 252 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 MT-CO2P00403 227 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 MFAP4P55083 255 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 TAS2R30P59541 319 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 CYCSP99999 105 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 DEFA5Q01523 94 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 KLF5Q13887 457 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 ETFRF1Q6IPR1 90 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 BSCL2Q96G97 398 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 SMIM8Q96KF7 97 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 DUX3Q96PT4 197 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 RAB40CQ96S21 281 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 GPR61Q9BZJ8 451 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 GSKIPQ9P0R6 139 aa13.13□□□□□ -0.31
CDK5RAP1-214ENST00000488723 FAM25EA8MYX2 175 aa13.12□□□□□ -0.31
CDK5RAP1-214ENST00000488723 BMPR1BO00238 502 aa13.12□□□□□ -0.31
CDK5RAP1-214ENST00000488723 HOXD3P31249 432 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP1-214ENST00000488723 NPBWR1P48145 328 aa13.12□□□□□ -0.31
CDK5RAP1-214ENST00000488723 IL15RAQ13261 267 aa13.12□□□□□ -0.31
CDK5RAP1-214ENST00000488723 CLEC19AQ6UXS0 136 aa13.12□□□□□ -0.31
CDK5RAP1-214ENST00000488723 GPHB5Q86YW7 130 aa13.12□□□□□ -0.31
CDK5RAP1-214ENST00000488723 CCSO14618 274 aa13.11□□□□□ -0.31
CDK5RAP1-214ENST00000488723 SSNA1O43805 119 aa13.11□□□□□ -0.31
CDK5RAP1-214ENST00000488723 SLC25A4P12235 298 aa13.11□□□□□ -0.31
CDK5RAP1-214ENST00000488723 ARL3P36405 182 aa13.11□□□□□ -0.31
CDK5RAP1-214ENST00000488723 GPX4P36969 197 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP1-214ENST00000488723 RAB11AP62491 216 aa13.11□□□□□ -0.31
CDK5RAP1-214ENST00000488723 RPEL1Q2QD12 228 aa13.11□□□□□ -0.31
CDK5RAP1-214ENST00000488723 TMEM170AQ8WVE7 144 aa13.11□□□□□ -0.31
CDK5RAP1-214ENST00000488723 CACNG8Q8WXS5 425 aa13.11□□□□□ -0.31
CDK5RAP1-214ENST00000488723 NMES1Q9C002 83 aa13.11□□□□□ -0.31
CDK5RAP1-214ENST00000488723 MAGT1Q9H0U3 335 aa13.11□□□□□ -0.31
CDK5RAP1-214ENST00000488723 OVOL1O14753 267 aa13.1□□□□□ -0.31
CDK5RAP1-214ENST00000488723 TGOLN2O43493 480 aa13.1□□□□□ -0.31
CDK5RAP1-214ENST00000488723 TRBV12-3P01733 135 aa13.1□□□□□ -0.31
CDK5RAP1-214ENST00000488723 MBPP02686 304 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP1-214ENST00000488723 OPRK1P41145 380 aa13.1□□□□□ -0.31
CDK5RAP1-214ENST00000488723 POLR2GP62487 172 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDK5RAP1-214ENST00000488723 OR4X1Q8NH49 305 aa13.1□□□□□ -0.31
CDK5RAP1-214ENST00000488723 DCUN1D4Q92564 292 aa13.1□□□□□ -0.31
CDK5RAP1-214ENST00000488723 DLX4Q92988 240 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP1-214ENST00000488723 PINX1Q96BK5 328 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP1-214ENST00000488723 STRAPQ9Y3F4 350 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP1-214ENST00000488723 TRAV30A0A087WSZ9 112 aa13.09□□□□□ -0.31
CDK5RAP1-214ENST00000488723 F8W735 103 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP1-214ENST00000488723 LGALS9O00182 355 aa13.09□□□□□ -0.31
CDK5RAP1-214ENST00000488723 TSC22D2O75157 780 aa13.09□□□□□ -0.31
CDK5RAP1-214ENST00000488723 SCGB2A1O75556 95 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms