RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SLC2A8Q9NY64 477 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 V9GYH0 126 aa9.71□□□□□ -0.86
HDAC1-209ENST00000484305 HUWE1Q7Z6Z7 4374 aaKnown RBP9.71□□□□□ -0.86
HDAC1-209ENST00000484305 IGHV3OR16-8A0A075B7F1 116 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 MT-CO2P00403 227 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 IFNA17P01571 189 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 IGHV3-48P01763 117 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 CTSGP08311 255 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 ELLP55199 621 aaPredicted RBP9.7□□□□□ -0.86
HDAC1-209ENST00000484305 BTNL8Q6UX41 500 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 SELENOHQ8IZQ5 122 aaKnown RBP9.7□□□□□ -0.86
HDAC1-209ENST00000484305 SLC35G3Q8N808 338 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 RNASE11Q8TAA1 199 aaKnown RBP9.7□□□□□ -0.86
HDAC1-209ENST00000484305 TMEM190Q8WZ59 177 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 ZNF414Q96IQ9 312 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 TM2D3Q9BRN9 247 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 TUBA4BQ9H853 241 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 MCUBQ9NWR8 336 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 MRPL27Q9P0M9 148 aaKnown RBP9.7□□□□□ -0.86
HDAC1-209ENST00000484305 UFC1Q9Y3C8 167 aa9.7□□□□□ -0.86
HDAC1-209ENST00000484305 INS-IGF2F8WCM5 200 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 NDUFA4O00483 81 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 SCAF4O95104 1147 aaKnown RBP9.69□□□□□ -0.86
HDAC1-209ENST00000484305 DHODHQ02127 395 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 HAGHQ16775 308 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 PYDC2Q56P42 97 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 TMEM268Q5VZI3 342 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 FAM219AQ8IW50 185 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 DEFB125Q8N687 156 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 RBPMSQ93062 196 aaKnown RBP9.69□□□□□ -0.86
HDAC1-209ENST00000484305 TRIM63Q969Q1 353 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 MARC2Q969Z3 335 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 TMEM230Q96A57 120 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 PINX1Q96BK5 328 aaKnown RBP9.69□□□□□ -0.86
HDAC1-209ENST00000484305 PDCD10Q9BUL8 212 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 WFDC10AQ9H1F0 79 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 ZMAT4Q9H898 229 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 PRR13Q9NZ81 148 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 SCP2D1Q9UJQ7 156 aa9.69□□□□□ -0.86
HDAC1-209ENST00000484305 ZNF207O43670 478 aaKnown RBP9.68□□□□□ -0.86
HDAC1-209ENST00000484305 RNASE2P10153 161 aaKnown RBP9.68□□□□□ -0.86
HDAC1-209ENST00000484305 FCGR2BP31994 310 aaPredicted RBP9.68□□□□□ -0.86
HDAC1-209ENST00000484305 S100A5P33763 92 aa9.68□□□□□ -0.86
HDAC1-209ENST00000484305 SNCAP37840 140 aa9.68□□□□□ -0.86
HDAC1-209ENST00000484305 HOXA1P49639 335 aaPredicted RBP9.68□□□□□ -0.86
HDAC1-209ENST00000484305 MFAP4P55083 255 aa9.68□□□□□ -0.86
HDAC1-209ENST00000484305 KLF9Q13886 244 aaPredicted RBP9.68□□□□□ -0.86
HDAC1-209ENST00000484305 TMEM187Q14656 261 aa9.68□□□□□ -0.86
HDAC1-209ENST00000484305 ZNF79Q15937 498 aa9.68□□□□□ -0.86
HDAC1-209ENST00000484305 AARDQ4LEZ3 155 aa9.68□□□□□ -0.86
HDAC1-209ENST00000484305 PVRIGQ6DKI7 326 aa9.68□□□□□ -0.86
HDAC1-209ENST00000484305 CCDC190Q86UF4 302 aa9.68□□□□□ -0.86
HDAC1-209ENST00000484305 GPR146Q96CH1 333 aa9.68□□□□□ -0.86
HDAC1-209ENST00000484305 TXN2Q99757 166 aa9.68□□□□□ -0.86
HDAC1-209ENST00000484305 C20orf24Q9BUV8 137 aa9.68□□□□□ -0.86
HDAC1-209ENST00000484305 DAZ1Q9NQZ3 744 aaKnown RBP9.68□□□□□ -0.86
HDAC1-209ENST00000484305 TMEM56-RWDD3S4R434 201 aa9.68□□□□□ -0.86
HDAC1-209ENST00000484305 OR11H12B2RN74 326 aa9.67□□□□□ -0.86
HDAC1-209ENST00000484305 ZNF701M0R085 212 aaPredicted RBP9.67□□□□□ -0.86
HDAC1-209ENST00000484305 AKR1C4P17516 323 aa9.67□□□□□ -0.86
HDAC1-209ENST00000484305 SUPT4H1P63272 117 aaKnown RBP9.67□□□□□ -0.86
HDAC1-209ENST00000484305 LINC00322Q6ZN03 302 aaPredicted RBP9.67□□□□□ -0.86
HDAC1-209ENST00000484305 TOMM5Q8N4H5 51 aa9.67□□□□□ -0.86
HDAC1-209ENST00000484305 GALNT14Q96FL9 552 aa9.67□□□□□ -0.86
HDAC1-209ENST00000484305 SCGB3A2Q96PL1 93 aa9.67□□□□□ -0.86
HDAC1-209ENST00000484305 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.67□□□□□ -0.86
HDAC1-209ENST00000484305 GAR1Q9NY12 217 aaKnown RBP9.67□□□□□ -0.86
HDAC1-209ENST00000484305 CACNG5Q9UF02 275 aa9.67□□□□□ -0.86
HDAC1-209ENST00000484305 TRAV25A0A0B4J276 109 aa9.66□□□□□ -0.86
HDAC1-209ENST00000484305 RBMY1BA6NDE4 496 aaKnown RBP9.66□□□□□ -0.86
HDAC1-209ENST00000484305 RBMY1EA6NEQ0 496 aaKnown RBP9.66□□□□□ -0.86
HDAC1-209ENST00000484305 K7EMT4 169 aa9.66□□□□□ -0.86
HDAC1-209ENST00000484305 NUPL2O15504 423 aaKnown RBP9.66□□□□□ -0.86
HDAC1-209ENST00000484305 GNG7O60262 68 aa9.66□□□□□ -0.86
HDAC1-209ENST00000484305 RBMY1DP0C7P1 496 aaKnown RBP9.66□□□□□ -0.86
HDAC1-209ENST00000484305 SUB1P53999 127 aaKnown RBP eCLIP9.66□□□□□ -0.86
HDAC1-209ENST00000484305 SPCS3P61009 180 aa9.66□□□□□ -0.86
HDAC1-209ENST00000484305 RBPMS2Q6ZRY4 209 aaKnown RBP9.66□□□□□ -0.86
HDAC1-209ENST00000484305 OR52B4Q8NGK2 314 aa9.66□□□□□ -0.86
HDAC1-209ENST00000484305 OR52E5Q8NH55 327 aa9.66□□□□□ -0.86
HDAC1-209ENST00000484305 SRD5A3Q9H8P0 318 aa9.66□□□□□ -0.86
HDAC1-209ENST00000484305 ENY2Q9NPA8 101 aa9.66□□□□□ -0.86
HDAC1-209ENST00000484305 KCNIP3Q9Y2W7 256 aa9.66□□□□□ -0.86
HDAC1-209ENST00000484305 C15orf62A8K5M9 175 aa9.65□□□□□ -0.86
HDAC1-209ENST00000484305 YIF1AO95070 293 aa9.65□□□□□ -0.86
HDAC1-209ENST00000484305 FAUP35544 74 aaKnown RBP9.65□□□□□ -0.86
HDAC1-209ENST00000484305 AP3S2P59780 193 aa9.65□□□□□ -0.86
HDAC1-209ENST00000484305 RELQ04864 619 aaPredicted RBP9.65□□□□□ -0.86
HDAC1-209ENST00000484305 MLANAQ16655 118 aa9.65□□□□□ -0.86
HDAC1-209ENST00000484305 BSXQ3C1V8 233 aa9.65□□□□□ -0.86
HDAC1-209ENST00000484305 SLC16A13Q7RTY0 426 aa9.65□□□□□ -0.86
HDAC1-209ENST00000484305 DUSP18Q8NEJ0 188 aa9.65□□□□□ -0.86
HDAC1-209ENST00000484305 IL22RA2Q969J5 263 aa9.65□□□□□ -0.86
HDAC1-209ENST00000484305 SPATA25Q9BR10 227 aa9.65□□□□□ -0.86
HDAC1-209ENST00000484305 FNDC4Q9H6D8 234 aaPredicted RBP9.65□□□□□ -0.86
HDAC1-209ENST00000484305 NBEAL2Q6ZNJ1 2754 aa9.65□□□□□ -0.86
HDAC1-209ENST00000484305 TSPAN4O14817 238 aa9.64□□□□□ -0.87
HDAC1-209ENST00000484305 NXPH3O95157 252 aa9.64□□□□□ -0.87
HDAC1-209ENST00000484305 NPBWR1P48145 328 aa9.64□□□□□ -0.87
HDAC1-209ENST00000484305 ANKRD55Q3KP44 614 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms