RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 VN1R17PQ8TDU5 208 aa9.2□□□□□ -0.94
VPS13D-204ENST00000469054 MARVELD1Q9BSK0 173 aa9.2□□□□□ -0.94
VPS13D-204ENST00000469054 HIPK2Q9H2X6 1198 aa9.2□□□□□ -0.94
VPS13D-204ENST00000469054 PALMDQ9NP74 551 aa9.2□□□□□ -0.94
VPS13D-204ENST00000469054 HEYLQ9NQ87 328 aaPredicted RBP9.2□□□□□ -0.94
VPS13D-204ENST00000469054 S4R3C0 116 aa9.2□□□□□ -0.94
VPS13D-204ENST00000469054 FAM90A26D6RGX4 464 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 K7EIM0 57 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 HOXD3P31249 432 aaPredicted RBP9.19□□□□□ -0.94
VPS13D-204ENST00000469054 HTR2BP41595 481 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 SLURP1P55000 103 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 BSXQ3C1V8 233 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 PVRIGQ6DKI7 326 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 CLEC19AQ6UXS0 136 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 UXS1Q8NBZ7 420 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 ZNF502Q8TBZ5 544 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 DTD1Q8TEA8 209 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 SCARB1Q8WTV0 552 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 DCUN1D4Q92564 292 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 DLX4Q92988 240 aaPredicted RBP9.19□□□□□ -0.94
VPS13D-204ENST00000469054 MISP3Q96FF7 219 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 RCC1LQ96I51 464 aaKnown RBP9.19□□□□□ -0.94
VPS13D-204ENST00000469054 CCDC140Q96MF4 163 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 RBKSQ9H477 322 aa9.19□□□□□ -0.94
VPS13D-204ENST00000469054 GPN1Q9HCN4 374 aaPredicted RBP9.19□□□□□ -0.94
VPS13D-204ENST00000469054 IGHV3-21A0A0B4J1V1 117 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 I3L2K1 104 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 CORTO00230 105 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 BMPR1BO00238 502 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 PRAF2O60831 178 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 MED6O75586 246 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 MT-CO2P00403 227 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 CLEC3BP05452 202 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 IGLL1P15814 213 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 CMYA5Q8N3K9 4069 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 SLC24A4Q8NFF2 622 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 PINX1Q96BK5 328 aaKnown RBP9.18□□□□□ -0.94
VPS13D-204ENST00000469054 OR10C1Q96KK4 312 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 MCRIP2Q9BUT9 160 aaKnown RBP9.18□□□□□ -0.94
VPS13D-204ENST00000469054 C21orf62Q9NYP8 219 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 U3KQ87 197 aa9.18□□□□□ -0.94
VPS13D-204ENST00000469054 SNRPGP15A8MWD9 76 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 PPP5D1E7EU14 171 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 OVOL1O14753 267 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 GGCTO75223 188 aaKnown RBP9.17□□□□□ -0.94
VPS13D-204ENST00000469054 PTTG1O95997 202 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 SPNP16150 400 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 NKX2-1P43699 371 aaPredicted RBP9.17□□□□□ -0.94
VPS13D-204ENST00000469054 ID3Q02535 119 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 DCTN2Q13561 401 aaKnown RBP9.17□□□□□ -0.94
VPS13D-204ENST00000469054 KLF5Q13887 457 aaPredicted RBP9.17□□□□□ -0.94
VPS13D-204ENST00000469054 RPEL1Q2QD12 228 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 C2orf83Q53S99 150 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 OXLD1Q5BKU9 147 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 C11orf87Q6NUJ2 197 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 NOXA1Q86UR1 476 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 OR4D5Q8NGN0 318 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 ATP6V0BQ99437 205 aa9.17□□□□□ -0.94
VPS13D-204ENST00000469054 G3V4G9 280 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 CCSO14618 274 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 SYNGR2O43760 224 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 IFNA10P01566 189 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 NPY1RP25929 384 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 GPR183P32249 361 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 ARL3P36405 182 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 MFAP4P55083 255 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 ATP5IP56385 69 aaPredicted RBP9.16□□□□□ -0.94
VPS13D-204ENST00000469054 TATDN3Q17R31 274 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 IAH1Q2TAA2 248 aaPredicted RBP9.16□□□□□ -0.94
VPS13D-204ENST00000469054 C4orf48Q5BLP8 95 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 SAMD5Q5TGI4 173 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 ZBTB8BQ8NAP8 495 aaPredicted RBP9.16□□□□□ -0.94
VPS13D-204ENST00000469054 TMEM170AQ8WVE7 144 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 CIB3Q96Q77 187 aaPredicted RBP9.16□□□□□ -0.94
VPS13D-204ENST00000469054 MAGT1Q9H0U3 335 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 GSKIPQ9P0R6 139 aa9.16□□□□□ -0.94
VPS13D-204ENST00000469054 C5orf51A6NDU8 294 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 FAM25EA8MYX2 175 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 SEC14L6B5MCN3 397 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 F8W735 103 aaPredicted RBP9.15□□□□□ -0.94
VPS13D-204ENST00000469054 TGOLN2O43493 480 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 OR2C1O95371 312 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 LY86O95711 162 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 IAPPP10997 89 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 FCGR2BP31994 310 aaPredicted RBP9.15□□□□□ -0.94
VPS13D-204ENST00000469054 OPRK1P41145 380 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 SYNJ2BPP57105 145 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 Q56UQ5 140 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 GPHB5Q86YW7 130 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 C1QL4Q86Z23 238 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 UBAC2Q8NBM4 344 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 RNASEH2CQ8TDP1 164 aaKnown RBP9.15□□□□□ -0.94
VPS13D-204ENST00000469054 BSCL2Q96G97 398 aaPredicted RBP9.15□□□□□ -0.94
VPS13D-204ENST00000469054 TXN2Q99757 166 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 GPR61Q9BZJ8 451 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 FNDC4Q9H6D8 234 aaPredicted RBP9.15□□□□□ -0.94
VPS13D-204ENST00000469054 ZC4H2Q9NQZ6 224 aa9.15□□□□□ -0.94
VPS13D-204ENST00000469054 GAR1Q9NY12 217 aaKnown RBP9.15□□□□□ -0.94
VPS13D-204ENST00000469054 MGAM2Q2M2H8 2515 aa9.14□□□□□ -0.95
VPS13D-204ENST00000469054 RPS10-NUDT3A0A1W2PQS6 291 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms